Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 KRT16P5-201ENST00000455284 522 ntBASIC16.52■□□□□ 0.24
PCDHGB1Q9Y5G3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHGB1Q9Y5G3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.52■□□□□ 0.24
PCDHGB1Q9Y5G3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHGB1Q9Y5G3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHGB1Q9Y5G3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGB1Q9Y5G3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGB1Q9Y5G3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.52■□□□□ 0.24
PCDHGB1Q9Y5G3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGB1Q9Y5G3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.52■□□□□ 0.23
PCDHGB1Q9Y5G3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGB1Q9Y5G3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGB1Q9Y5G3 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGB1Q9Y5G3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHGB1Q9Y5G3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PCDHGB1Q9Y5G3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.51■□□□□ 0.23
PCDHGB1Q9Y5G3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PCDHGB1Q9Y5G3 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHGB1Q9Y5G3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGB1Q9Y5G3 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB1Q9Y5G3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB1Q9Y5G3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB1Q9Y5G3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB1Q9Y5G3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB1Q9Y5G3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHGB1Q9Y5G3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB1Q9Y5G3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB1Q9Y5G3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB1Q9Y5G3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB1Q9Y5G3 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB1Q9Y5G3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHGB1Q9Y5G3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB1Q9Y5G3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.51■□□□□ 0.23
PCDHGB1Q9Y5G3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.51■□□□□ 0.23
PCDHGB1Q9Y5G3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.51■□□□□ 0.23
PCDHGB1Q9Y5G3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGB1Q9Y5G3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB1Q9Y5G3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB1Q9Y5G3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PCDHGB1Q9Y5G3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB1Q9Y5G3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGB1Q9Y5G3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB1Q9Y5G3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PCDHGB1Q9Y5G3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB1Q9Y5G3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGB1Q9Y5G3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHGB1Q9Y5G3 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGB1Q9Y5G3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGB1Q9Y5G3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB1Q9Y5G3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PCDHGB1Q9Y5G3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 AL391005.1-201ENST00000623953 2435 ntBASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 AL355312.1-201ENST00000407115 2176 ntBASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 KRT17P3-201ENST00000420566 1262 ntBASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 AC073912.3-201ENST00000624414 853 ntBASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 CROCCP2-202ENST00000412962 2773 ntBASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 AC105020.1-201ENST00000435356 2205 ntBASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB1Q9Y5G3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms