Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 EMD-201ENST00000369835 966 ntTSL 3 BASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 AC132008.2-207ENST00000454517 770 ntBASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 AL160237.2-201ENST00000556165 472 ntBASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 AC104692.2-201ENST00000603054 253 ntBASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 AL121912.1-201ENST00000603683 238 ntBASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 AL096828.2-201ENST00000567259 1965 ntBASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00588Q9Y4M8 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 SP100-208ENST00000427101 1922 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 FDX1P1-201ENST00000449115 551 ntBASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 AF238378.1-201ENST00000526806 358 ntBASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 WDR88-203ENST00000592765 651 ntTSL 5 BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 AC011467.2-201ENST00000598425 242 ntBASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 AC022898.2-201ENST00000616822 1312 ntBASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 AC093677.2-201ENST00000600169 1863 ntBASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00588Q9Y4M8 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00588Q9Y4M8 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms