Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 AC009078.2-202ENST00000463353 338 ntBASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 AC104390.1-201ENST00000555663 520 ntBASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FNDC3AQ9Y2H6 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FNDC3AQ9Y2H6 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
FNDC3AQ9Y2H6 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
FNDC3AQ9Y2H6 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
FNDC3AQ9Y2H6 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.41■□□□□ 0.54
FNDC3AQ9Y2H6 AL391807.1-203ENST00000604392 2365 ntBASIC18.41■□□□□ 0.54
FNDC3AQ9Y2H6 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
FNDC3AQ9Y2H6 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.41■□□□□ 0.54
FNDC3AQ9Y2H6 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FNDC3AQ9Y2H6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.41■□□□□ 0.54
FNDC3AQ9Y2H6 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
FNDC3AQ9Y2H6 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FNDC3AQ9Y2H6 AL163051.1-201ENST00000569214 1512 ntBASIC18.41■□□□□ 0.54
FNDC3AQ9Y2H6 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FNDC3AQ9Y2H6 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.41■□□□□ 0.54
FNDC3AQ9Y2H6 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.41■□□□□ 0.54
FNDC3AQ9Y2H6 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
FNDC3AQ9Y2H6 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
FNDC3AQ9Y2H6 EMBP1-201ENST00000458200 901 ntBASIC18.41■□□□□ 0.54
FNDC3AQ9Y2H6 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.41■□□□□ 0.54
FNDC3AQ9Y2H6 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.41■□□□□ 0.54
FNDC3AQ9Y2H6 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
FNDC3AQ9Y2H6 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FNDC3AQ9Y2H6 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.41■□□□□ 0.54
FNDC3AQ9Y2H6 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
FNDC3AQ9Y2H6 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FNDC3AQ9Y2H6 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
FNDC3AQ9Y2H6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FNDC3AQ9Y2H6 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
FNDC3AQ9Y2H6 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.41■□□□□ 0.54
FNDC3AQ9Y2H6 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.41■□□□□ 0.54
FNDC3AQ9Y2H6 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FNDC3AQ9Y2H6 KRT8P7-201ENST00000533003 1432 ntBASIC18.4■□□□□ 0.54
FNDC3AQ9Y2H6 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
FNDC3AQ9Y2H6 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.4■□□□□ 0.54
FNDC3AQ9Y2H6 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.4■□□□□ 0.54
FNDC3AQ9Y2H6 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FNDC3AQ9Y2H6 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
FNDC3AQ9Y2H6 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
FNDC3AQ9Y2H6 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
FNDC3AQ9Y2H6 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FNDC3AQ9Y2H6 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FNDC3AQ9Y2H6 AC018470.1-201ENST00000624790 3129 ntBASIC18.4■□□□□ 0.54
FNDC3AQ9Y2H6 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.4■□□□□ 0.54
FNDC3AQ9Y2H6 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FNDC3AQ9Y2H6 MIR662-201ENST00000384847 95 ntBASIC18.4■□□□□ 0.54
FNDC3AQ9Y2H6 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.4■□□□□ 0.54
FNDC3AQ9Y2H6 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.4■□□□□ 0.54
FNDC3AQ9Y2H6 KRT18P41-201ENST00000518924 1277 ntBASIC18.4■□□□□ 0.54
FNDC3AQ9Y2H6 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FNDC3AQ9Y2H6 TPSP2-201ENST00000561760 610 ntBASIC18.4■□□□□ 0.54
FNDC3AQ9Y2H6 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.4■□□□□ 0.54
FNDC3AQ9Y2H6 RNF126P1-202ENST00000569893 925 ntBASIC18.4■□□□□ 0.54
FNDC3AQ9Y2H6 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
FNDC3AQ9Y2H6 MIR3917-201ENST00000580971 93 ntBASIC18.4■□□□□ 0.54
FNDC3AQ9Y2H6 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.4■□□□□ 0.54
FNDC3AQ9Y2H6 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FNDC3AQ9Y2H6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FNDC3AQ9Y2H6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.4■□□□□ 0.54
FNDC3AQ9Y2H6 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FNDC3AQ9Y2H6 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FNDC3AQ9Y2H6 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FNDC3AQ9Y2H6 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.4■□□□□ 0.54
FNDC3AQ9Y2H6 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
FNDC3AQ9Y2H6 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FNDC3AQ9Y2H6 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
FNDC3AQ9Y2H6 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FNDC3AQ9Y2H6 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.4■□□□□ 0.54
FNDC3AQ9Y2H6 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FNDC3AQ9Y2H6 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
FNDC3AQ9Y2H6 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
FNDC3AQ9Y2H6 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
FNDC3AQ9Y2H6 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
FNDC3AQ9Y2H6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
FNDC3AQ9Y2H6 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.39■□□□□ 0.53
FNDC3AQ9Y2H6 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
FNDC3AQ9Y2H6 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
FNDC3AQ9Y2H6 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.39■□□□□ 0.53
FNDC3AQ9Y2H6 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
FNDC3AQ9Y2H6 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms