Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PDZRN3Q9UPQ7 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
PDZRN3Q9UPQ7 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC23.19■■□□□ 1.3
PDZRN3Q9UPQ7 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC23.19■■□□□ 1.3
PDZRN3Q9UPQ7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC23.19■■□□□ 1.3
PDZRN3Q9UPQ7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC23.19■■□□□ 1.3
PDZRN3Q9UPQ7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC23.19■■□□□ 1.3
PDZRN3Q9UPQ7 AL592071.1-201ENST00000611956 408 ntBASIC23.19■■□□□ 1.3
PDZRN3Q9UPQ7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC23.19■■□□□ 1.3
PDZRN3Q9UPQ7 AC008556.1-201ENST00000610908 2040 ntBASIC23.19■■□□□ 1.3
PDZRN3Q9UPQ7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PDZRN3Q9UPQ7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC23.19■■□□□ 1.3
PDZRN3Q9UPQ7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC23.19■■□□□ 1.3
PDZRN3Q9UPQ7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC23.19■■□□□ 1.3
PDZRN3Q9UPQ7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PDZRN3Q9UPQ7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC23.18■■□□□ 1.3
PDZRN3Q9UPQ7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PDZRN3Q9UPQ7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC23.18■■□□□ 1.3
PDZRN3Q9UPQ7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PDZRN3Q9UPQ7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDZRN3Q9UPQ7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC23.18■■□□□ 1.3
PDZRN3Q9UPQ7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDZRN3Q9UPQ7 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDZRN3Q9UPQ7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDZRN3Q9UPQ7 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PDZRN3Q9UPQ7 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC23.18■■□□□ 1.3
PDZRN3Q9UPQ7 MIR564-202ENST00000385049 94 ntBASIC23.18■■□□□ 1.3
PDZRN3Q9UPQ7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC23.18■■□□□ 1.3
PDZRN3Q9UPQ7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC23.18■■□□□ 1.3
PDZRN3Q9UPQ7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC23.18■■□□□ 1.3
PDZRN3Q9UPQ7 AP001005.1-201ENST00000571755 1248 ntBASIC23.18■■□□□ 1.3
PDZRN3Q9UPQ7 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PDZRN3Q9UPQ7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC23.18■■□□□ 1.3
PDZRN3Q9UPQ7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC23.18■■□□□ 1.3
PDZRN3Q9UPQ7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDZRN3Q9UPQ7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
PDZRN3Q9UPQ7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
PDZRN3Q9UPQ7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDZRN3Q9UPQ7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PDZRN3Q9UPQ7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDZRN3Q9UPQ7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDZRN3Q9UPQ7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC23.17■■□□□ 1.3
PDZRN3Q9UPQ7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PDZRN3Q9UPQ7 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PDZRN3Q9UPQ7 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDZRN3Q9UPQ7 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
PDZRN3Q9UPQ7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDZRN3Q9UPQ7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDZRN3Q9UPQ7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PDZRN3Q9UPQ7 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDZRN3Q9UPQ7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC23.17■■□□□ 1.3
PDZRN3Q9UPQ7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
PDZRN3Q9UPQ7 POM121L3P-201ENST00000419331 1163 ntBASIC23.17■■□□□ 1.3
PDZRN3Q9UPQ7 TSPY12P-201ENST00000421279 868 ntBASIC23.17■■□□□ 1.3
PDZRN3Q9UPQ7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC23.17■■□□□ 1.3
PDZRN3Q9UPQ7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
PDZRN3Q9UPQ7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC23.17■■□□□ 1.3
PDZRN3Q9UPQ7 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
PDZRN3Q9UPQ7 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC23.17■■□□□ 1.3
PDZRN3Q9UPQ7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
PDZRN3Q9UPQ7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC23.17■■□□□ 1.3
PDZRN3Q9UPQ7 NME4-212ENST00000621774 904 ntTSL 3 BASIC23.17■■□□□ 1.3
PDZRN3Q9UPQ7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC23.17■■□□□ 1.3
PDZRN3Q9UPQ7 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDZRN3Q9UPQ7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDZRN3Q9UPQ7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDZRN3Q9UPQ7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PDZRN3Q9UPQ7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC23.17■■□□□ 1.3
PDZRN3Q9UPQ7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDZRN3Q9UPQ7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PDZRN3Q9UPQ7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
PDZRN3Q9UPQ7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC23.17■■□□□ 1.3
PDZRN3Q9UPQ7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC23.17■■□□□ 1.3
PDZRN3Q9UPQ7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDZRN3Q9UPQ7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
PDZRN3Q9UPQ7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
PDZRN3Q9UPQ7 ESPNP-201ENST00000270691 2015 ntBASIC23.16■■□□□ 1.3
PDZRN3Q9UPQ7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PDZRN3Q9UPQ7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
PDZRN3Q9UPQ7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
PDZRN3Q9UPQ7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
PDZRN3Q9UPQ7 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDZRN3Q9UPQ7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PDZRN3Q9UPQ7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDZRN3Q9UPQ7 AC093677.2-201ENST00000600169 1863 ntBASIC23.16■■□□□ 1.3
PDZRN3Q9UPQ7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDZRN3Q9UPQ7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDZRN3Q9UPQ7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
PDZRN3Q9UPQ7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDZRN3Q9UPQ7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDZRN3Q9UPQ7 TLE1-202ENST00000376484 666 ntTSL 3 BASIC23.16■■□□□ 1.3
PDZRN3Q9UPQ7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC23.16■■□□□ 1.3
PDZRN3Q9UPQ7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC23.16■■□□□ 1.3
PDZRN3Q9UPQ7 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDZRN3Q9UPQ7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PDZRN3Q9UPQ7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC23.16■■□□□ 1.3
PDZRN3Q9UPQ7 CDV3-207ENST00000508481 661 ntTSL 3 BASIC23.16■■□□□ 1.3
PDZRN3Q9UPQ7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC23.16■■□□□ 1.3
PDZRN3Q9UPQ7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC23.16■■□□□ 1.3
PDZRN3Q9UPQ7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms