Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE7Q9UBL6 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.42■□□□□ 0.38
CPNE7Q9UBL6 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CPNE7Q9UBL6 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE7Q9UBL6 AKR1C7P-201ENST00000305623 895 ntBASIC17.42■□□□□ 0.38
CPNE7Q9UBL6 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE7Q9UBL6 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
CPNE7Q9UBL6 SAPCD2P3-201ENST00000455031 850 ntBASIC17.42■□□□□ 0.38
CPNE7Q9UBL6 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.42■□□□□ 0.38
CPNE7Q9UBL6 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.42■□□□□ 0.38
CPNE7Q9UBL6 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.42■□□□□ 0.38
CPNE7Q9UBL6 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CPNE7Q9UBL6 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE7Q9UBL6 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CPNE7Q9UBL6 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.42■□□□□ 0.38
CPNE7Q9UBL6 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.42■□□□□ 0.38
CPNE7Q9UBL6 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.42■□□□□ 0.38
CPNE7Q9UBL6 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.42■□□□□ 0.38
CPNE7Q9UBL6 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.42■□□□□ 0.38
CPNE7Q9UBL6 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.42■□□□□ 0.38
CPNE7Q9UBL6 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE7Q9UBL6 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE7Q9UBL6 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.42■□□□□ 0.38
CPNE7Q9UBL6 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE7Q9UBL6 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE7Q9UBL6 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.42■□□□□ 0.38
CPNE7Q9UBL6 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE7Q9UBL6 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
CPNE7Q9UBL6 AL096828.2-201ENST00000567259 1965 ntBASIC17.42■□□□□ 0.38
CPNE7Q9UBL6 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
CPNE7Q9UBL6 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE7Q9UBL6 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE7Q9UBL6 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE7Q9UBL6 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.42■□□□□ 0.38
CPNE7Q9UBL6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPNE7Q9UBL6 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CPNE7Q9UBL6 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
CPNE7Q9UBL6 AC093677.2-201ENST00000600169 1863 ntBASIC17.41■□□□□ 0.38
CPNE7Q9UBL6 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE7Q9UBL6 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE7Q9UBL6 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE7Q9UBL6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CPNE7Q9UBL6 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.41■□□□□ 0.38
CPNE7Q9UBL6 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CPNE7Q9UBL6 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.41■□□□□ 0.38
CPNE7Q9UBL6 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE7Q9UBL6 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE7Q9UBL6 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.41■□□□□ 0.38
CPNE7Q9UBL6 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.41■□□□□ 0.38
CPNE7Q9UBL6 AC079781.3-201ENST00000449110 356 ntBASIC17.41■□□□□ 0.38
CPNE7Q9UBL6 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE7Q9UBL6 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE7Q9UBL6 DUTP2-201ENST00000519164 463 ntBASIC17.41■□□□□ 0.38
CPNE7Q9UBL6 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CPNE7Q9UBL6 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.41■□□□□ 0.38
CPNE7Q9UBL6 AL121912.1-201ENST00000603683 238 ntBASIC17.41■□□□□ 0.38
CPNE7Q9UBL6 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.41■□□□□ 0.38
CPNE7Q9UBL6 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE7Q9UBL6 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE7Q9UBL6 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE7Q9UBL6 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE7Q9UBL6 AC022898.2-201ENST00000616822 1312 ntBASIC17.41■□□□□ 0.38
CPNE7Q9UBL6 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE7Q9UBL6 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CPNE7Q9UBL6 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
CPNE7Q9UBL6 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE7Q9UBL6 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE7Q9UBL6 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE7Q9UBL6 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE7Q9UBL6 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.4■□□□□ 0.38
CPNE7Q9UBL6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE7Q9UBL6 KRT8P10-201ENST00000450021 1447 ntBASIC17.4■□□□□ 0.38
CPNE7Q9UBL6 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE7Q9UBL6 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE7Q9UBL6 AC135776.1-201ENST00000319817 2481 ntBASIC17.4■□□□□ 0.38
CPNE7Q9UBL6 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.4■□□□□ 0.38
CPNE7Q9UBL6 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE7Q9UBL6 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE7Q9UBL6 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CPNE7Q9UBL6 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE7Q9UBL6 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
CPNE7Q9UBL6 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.4■□□□□ 0.38
CPNE7Q9UBL6 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE7Q9UBL6 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE7Q9UBL6 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.4■□□□□ 0.38
CPNE7Q9UBL6 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE7Q9UBL6 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.4■□□□□ 0.38
CPNE7Q9UBL6 AL160237.2-201ENST00000556165 472 ntBASIC17.4■□□□□ 0.38
CPNE7Q9UBL6 AC011467.2-201ENST00000598425 242 ntBASIC17.4■□□□□ 0.38
CPNE7Q9UBL6 AC104692.2-201ENST00000603054 253 ntBASIC17.4■□□□□ 0.38
CPNE7Q9UBL6 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.4■□□□□ 0.38
CPNE7Q9UBL6 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE7Q9UBL6 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE7Q9UBL6 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CPNE7Q9UBL6 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CPNE7Q9UBL6 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE7Q9UBL6 AC020763.4-201ENST00000623414 4170 ntBASIC17.4■□□□□ 0.38
CPNE7Q9UBL6 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CPNE7Q9UBL6 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE7Q9UBL6 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms