Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPHK1Q9NYA1 NSUN5P1-202ENST00000421140 1535 ntBASIC17.32■□□□□ 0.36
SPHK1Q9NYA1 NSUN5P2-203ENST00000457352 1529 ntBASIC17.32■□□□□ 0.36
SPHK1Q9NYA1 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SPHK1Q9NYA1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SPHK1Q9NYA1 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SPHK1Q9NYA1 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SPHK1Q9NYA1 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.32■□□□□ 0.36
SPHK1Q9NYA1 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPHK1Q9NYA1 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPHK1Q9NYA1 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPHK1Q9NYA1 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SPHK1Q9NYA1 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SPHK1Q9NYA1 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.32■□□□□ 0.36
SPHK1Q9NYA1 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.32■□□□□ 0.36
SPHK1Q9NYA1 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.32■□□□□ 0.36
SPHK1Q9NYA1 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.32■□□□□ 0.36
SPHK1Q9NYA1 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.32■□□□□ 0.36
SPHK1Q9NYA1 AL354751.1-201ENST00000412768 1863 ntBASIC17.32■□□□□ 0.36
SPHK1Q9NYA1 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPHK1Q9NYA1 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.32■□□□□ 0.36
SPHK1Q9NYA1 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.32■□□□□ 0.36
SPHK1Q9NYA1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SPHK1Q9NYA1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPHK1Q9NYA1 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.32■□□□□ 0.36
SPHK1Q9NYA1 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SPHK1Q9NYA1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SPHK1Q9NYA1 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 PRELID1P1-202ENST00000567272 903 ntBASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPHK1Q9NYA1 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.3■□□□□ 0.36
SPHK1Q9NYA1 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SPHK1Q9NYA1 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SPHK1Q9NYA1 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SPHK1Q9NYA1 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SPHK1Q9NYA1 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SPHK1Q9NYA1 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SPHK1Q9NYA1 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SPHK1Q9NYA1 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SPHK1Q9NYA1 KRT8P47-201ENST00000604727 1398 ntBASIC17.3■□□□□ 0.36
SPHK1Q9NYA1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SPHK1Q9NYA1 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SPHK1Q9NYA1 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SPHK1Q9NYA1 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.3■□□□□ 0.36
SPHK1Q9NYA1 AC100803.2-201ENST00000562459 1963 ntBASIC17.3■□□□□ 0.36
SPHK1Q9NYA1 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SPHK1Q9NYA1 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SPHK1Q9NYA1 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
SPHK1Q9NYA1 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
SPHK1Q9NYA1 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SPHK1Q9NYA1 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.3■□□□□ 0.36
SPHK1Q9NYA1 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.3■□□□□ 0.36
SPHK1Q9NYA1 FOSL1P1-201ENST00000511041 816 ntBASIC17.3■□□□□ 0.36
SPHK1Q9NYA1 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.3■□□□□ 0.36
SPHK1Q9NYA1 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.3■□□□□ 0.36
SPHK1Q9NYA1 AC099336.1-202ENST00000602961 463 ntBASIC17.3■□□□□ 0.36
SPHK1Q9NYA1 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SPHK1Q9NYA1 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms