Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MKS1Q9NXB0 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MKS1Q9NXB0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.77■□□□□ 0.44
MKS1Q9NXB0 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
MKS1Q9NXB0 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MKS1Q9NXB0 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MKS1Q9NXB0 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
MKS1Q9NXB0 AL356309.3-201ENST00000624132 1934 ntBASIC17.77■□□□□ 0.44
MKS1Q9NXB0 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MKS1Q9NXB0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MKS1Q9NXB0 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MKS1Q9NXB0 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
MKS1Q9NXB0 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.77■□□□□ 0.44
MKS1Q9NXB0 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
MKS1Q9NXB0 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.77■□□□□ 0.44
MKS1Q9NXB0 BX088651.1-201ENST00000540551 451 ntBASIC17.77■□□□□ 0.44
MKS1Q9NXB0 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.77■□□□□ 0.44
MKS1Q9NXB0 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.77■□□□□ 0.44
MKS1Q9NXB0 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MKS1Q9NXB0 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
MKS1Q9NXB0 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MKS1Q9NXB0 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.77■□□□□ 0.43
MKS1Q9NXB0 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
MKS1Q9NXB0 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.77■□□□□ 0.43
MKS1Q9NXB0 AL118508.1-201ENST00000613502 2345 ntBASIC17.77■□□□□ 0.43
MKS1Q9NXB0 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
MKS1Q9NXB0 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
MKS1Q9NXB0 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.77■□□□□ 0.43
MKS1Q9NXB0 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
MKS1Q9NXB0 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MKS1Q9NXB0 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
MKS1Q9NXB0 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MKS1Q9NXB0 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
MKS1Q9NXB0 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
MKS1Q9NXB0 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MKS1Q9NXB0 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
MKS1Q9NXB0 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
MKS1Q9NXB0 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
MKS1Q9NXB0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.76■□□□□ 0.43
MKS1Q9NXB0 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MKS1Q9NXB0 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.76■□□□□ 0.43
MKS1Q9NXB0 RPS2P55-201ENST00000397318 883 ntBASIC17.76■□□□□ 0.43
MKS1Q9NXB0 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MKS1Q9NXB0 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MKS1Q9NXB0 SEC1P-202ENST00000473944 940 ntBASIC17.76■□□□□ 0.43
MKS1Q9NXB0 AC107956.1-201ENST00000494359 873 ntBASIC17.76■□□□□ 0.43
MKS1Q9NXB0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.76■□□□□ 0.43
MKS1Q9NXB0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.76■□□□□ 0.43
MKS1Q9NXB0 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MKS1Q9NXB0 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.76■□□□□ 0.43
MKS1Q9NXB0 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MKS1Q9NXB0 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
MKS1Q9NXB0 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MKS1Q9NXB0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
MKS1Q9NXB0 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
MKS1Q9NXB0 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
MKS1Q9NXB0 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MKS1Q9NXB0 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
MKS1Q9NXB0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
MKS1Q9NXB0 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
MKS1Q9NXB0 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.75■□□□□ 0.43
MKS1Q9NXB0 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MKS1Q9NXB0 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MKS1Q9NXB0 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
MKS1Q9NXB0 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MKS1Q9NXB0 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.75■□□□□ 0.43
MKS1Q9NXB0 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MKS1Q9NXB0 CCR12P-201ENST00000446203 998 ntBASIC17.75■□□□□ 0.43
MKS1Q9NXB0 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.75■□□□□ 0.43
MKS1Q9NXB0 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
MKS1Q9NXB0 AC233702.5-201ENST00000584107 538 ntBASIC17.75■□□□□ 0.43
MKS1Q9NXB0 AP001412.1-201ENST00000608405 714 ntBASIC17.75■□□□□ 0.43
MKS1Q9NXB0 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.75■□□□□ 0.43
MKS1Q9NXB0 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MKS1Q9NXB0 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MKS1Q9NXB0 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MKS1Q9NXB0 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MKS1Q9NXB0 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MKS1Q9NXB0 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MKS1Q9NXB0 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
MKS1Q9NXB0 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.75■□□□□ 0.43
MKS1Q9NXB0 AC009949.1-201ENST00000623048 1830 ntBASIC17.75■□□□□ 0.43
MKS1Q9NXB0 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MKS1Q9NXB0 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MKS1Q9NXB0 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MKS1Q9NXB0 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
MKS1Q9NXB0 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MKS1Q9NXB0 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MKS1Q9NXB0 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.74■□□□□ 0.43
MKS1Q9NXB0 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.74■□□□□ 0.43
MKS1Q9NXB0 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
MKS1Q9NXB0 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MKS1Q9NXB0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.74■□□□□ 0.43
MKS1Q9NXB0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
MKS1Q9NXB0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.74■□□□□ 0.43
MKS1Q9NXB0 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.74■□□□□ 0.43
MKS1Q9NXB0 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.74■□□□□ 0.43
MKS1Q9NXB0 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.74■□□□□ 0.43
MKS1Q9NXB0 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MKS1Q9NXB0 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms