Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHD8Q9HCK8 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHD8Q9HCK8 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHD8Q9HCK8 GPS2P2-201ENST00000430745 888 ntBASIC16.6■□□□□ 0.25
CHD8Q9HCK8 KRT18P65-201ENST00000439811 1286 ntBASIC16.6■□□□□ 0.25
CHD8Q9HCK8 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.6■□□□□ 0.25
CHD8Q9HCK8 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CHD8Q9HCK8 AC112191.1-201ENST00000523689 701 ntBASIC16.6■□□□□ 0.25
CHD8Q9HCK8 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.6■□□□□ 0.25
CHD8Q9HCK8 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.6■□□□□ 0.25
CHD8Q9HCK8 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC16.6■□□□□ 0.25
CHD8Q9HCK8 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHD8Q9HCK8 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC16.6■□□□□ 0.25
CHD8Q9HCK8 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHD8Q9HCK8 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHD8Q9HCK8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHD8Q9HCK8 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHD8Q9HCK8 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHD8Q9HCK8 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHD8Q9HCK8 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
CHD8Q9HCK8 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHD8Q9HCK8 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.59■□□□□ 0.25
CHD8Q9HCK8 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.59■□□□□ 0.25
CHD8Q9HCK8 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHD8Q9HCK8 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHD8Q9HCK8 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHD8Q9HCK8 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.59■□□□□ 0.25
CHD8Q9HCK8 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.59■□□□□ 0.25
CHD8Q9HCK8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHD8Q9HCK8 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHD8Q9HCK8 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHD8Q9HCK8 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CHD8Q9HCK8 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHD8Q9HCK8 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHD8Q9HCK8 KRT8P48-201ENST00000515599 1220 ntBASIC16.59■□□□□ 0.25
CHD8Q9HCK8 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.59■□□□□ 0.25
CHD8Q9HCK8 AC019129.2-201ENST00000609837 1235 ntBASIC16.59■□□□□ 0.25
CHD8Q9HCK8 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CHD8Q9HCK8 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.59■□□□□ 0.25
CHD8Q9HCK8 AC004706.3-202ENST00000621574 984 ntBASIC16.59■□□□□ 0.25
CHD8Q9HCK8 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHD8Q9HCK8 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHD8Q9HCK8 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
CHD8Q9HCK8 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.58■□□□□ 0.25
CHD8Q9HCK8 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHD8Q9HCK8 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHD8Q9HCK8 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHD8Q9HCK8 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CHD8Q9HCK8 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.58■□□□□ 0.25
CHD8Q9HCK8 AC097493.3-201ENST00000509725 367 ntBASIC16.58■□□□□ 0.25
CHD8Q9HCK8 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
CHD8Q9HCK8 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.58■□□□□ 0.25
CHD8Q9HCK8 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.58■□□□□ 0.25
CHD8Q9HCK8 MIR6787-201ENST00000616675 61 ntBASIC16.58■□□□□ 0.25
CHD8Q9HCK8 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHD8Q9HCK8 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC16.58■□□□□ 0.24
CHD8Q9HCK8 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHD8Q9HCK8 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.58■□□□□ 0.24
CHD8Q9HCK8 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.58■□□□□ 0.24
CHD8Q9HCK8 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHD8Q9HCK8 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHD8Q9HCK8 BCYRN1-201ENST00000418539 200 ntBASIC16.58■□□□□ 0.24
CHD8Q9HCK8 RPS15P9-201ENST00000494093 319 ntBASIC16.58■□□□□ 0.24
CHD8Q9HCK8 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHD8Q9HCK8 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHD8Q9HCK8 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
CHD8Q9HCK8 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHD8Q9HCK8 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHD8Q9HCK8 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.58■□□□□ 0.24
CHD8Q9HCK8 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.58■□□□□ 0.24
CHD8Q9HCK8 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.57■□□□□ 0.24
CHD8Q9HCK8 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHD8Q9HCK8 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHD8Q9HCK8 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHD8Q9HCK8 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.57■□□□□ 0.24
CHD8Q9HCK8 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.57■□□□□ 0.24
CHD8Q9HCK8 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.57■□□□□ 0.24
CHD8Q9HCK8 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.57■□□□□ 0.24
CHD8Q9HCK8 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHD8Q9HCK8 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHD8Q9HCK8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHD8Q9HCK8 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.57■□□□□ 0.24
CHD8Q9HCK8 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.57■□□□□ 0.24
CHD8Q9HCK8 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHD8Q9HCK8 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.57■□□□□ 0.24
CHD8Q9HCK8 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.57■□□□□ 0.24
CHD8Q9HCK8 AC092580.3-201ENST00000430932 139 ntBASIC16.57■□□□□ 0.24
CHD8Q9HCK8 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.57■□□□□ 0.24
CHD8Q9HCK8 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.57■□□□□ 0.24
CHD8Q9HCK8 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHD8Q9HCK8 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHD8Q9HCK8 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHD8Q9HCK8 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.57■□□□□ 0.24
CHD8Q9HCK8 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
CHD8Q9HCK8 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
CHD8Q9HCK8 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CHD8Q9HCK8 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CHD8Q9HCK8 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHD8Q9HCK8 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
CHD8Q9HCK8 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms