Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 AL158211.5-201ENST00000623583 2518 ntBASIC20.46■□□□□ 0.87
ZFYVE28Q9HCC9 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZFYVE28Q9HCC9 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.46■□□□□ 0.87
ZFYVE28Q9HCC9 RPS15P9-201ENST00000494093 319 ntBASIC20.46■□□□□ 0.87
ZFYVE28Q9HCC9 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC20.46■□□□□ 0.87
ZFYVE28Q9HCC9 PUS1-205ENST00000535067 838 ntTSL 3 BASIC20.46■□□□□ 0.87
ZFYVE28Q9HCC9 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ZFYVE28Q9HCC9 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC20.46■□□□□ 0.87
ZFYVE28Q9HCC9 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.46■□□□□ 0.87
ZFYVE28Q9HCC9 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ZFYVE28Q9HCC9 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.46■□□□□ 0.87
ZFYVE28Q9HCC9 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZFYVE28Q9HCC9 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZFYVE28Q9HCC9 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ZFYVE28Q9HCC9 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.46■□□□□ 0.87
ZFYVE28Q9HCC9 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.46■□□□□ 0.87
ZFYVE28Q9HCC9 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
ZFYVE28Q9HCC9 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
ZFYVE28Q9HCC9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.45■□□□□ 0.86
ZFYVE28Q9HCC9 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
ZFYVE28Q9HCC9 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ZFYVE28Q9HCC9 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.45■□□□□ 0.86
ZFYVE28Q9HCC9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ZFYVE28Q9HCC9 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZFYVE28Q9HCC9 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ZFYVE28Q9HCC9 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC20.45■□□□□ 0.86
ZFYVE28Q9HCC9 AL096865.1-201ENST00000606796 927 ntBASIC20.45■□□□□ 0.86
ZFYVE28Q9HCC9 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC20.45■□□□□ 0.86
ZFYVE28Q9HCC9 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.45■□□□□ 0.86
ZFYVE28Q9HCC9 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZFYVE28Q9HCC9 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.45■□□□□ 0.86
ZFYVE28Q9HCC9 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZFYVE28Q9HCC9 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ZFYVE28Q9HCC9 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.45■□□□□ 0.86
ZFYVE28Q9HCC9 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.44■□□□□ 0.86
ZFYVE28Q9HCC9 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZFYVE28Q9HCC9 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
ZFYVE28Q9HCC9 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZFYVE28Q9HCC9 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
ZFYVE28Q9HCC9 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZFYVE28Q9HCC9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ZFYVE28Q9HCC9 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.44■□□□□ 0.86
ZFYVE28Q9HCC9 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
ZFYVE28Q9HCC9 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZFYVE28Q9HCC9 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC20.44■□□□□ 0.86
ZFYVE28Q9HCC9 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.44■□□□□ 0.86
ZFYVE28Q9HCC9 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC20.44■□□□□ 0.86
ZFYVE28Q9HCC9 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ZFYVE28Q9HCC9 AP000344.2-201ENST00000512987 629 ntBASIC20.44■□□□□ 0.86
ZFYVE28Q9HCC9 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZFYVE28Q9HCC9 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
ZFYVE28Q9HCC9 PDPK2P-202ENST00000562415 1191 ntBASIC20.44■□□□□ 0.86
ZFYVE28Q9HCC9 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
ZFYVE28Q9HCC9 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.44■□□□□ 0.86
ZFYVE28Q9HCC9 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.44■□□□□ 0.86
ZFYVE28Q9HCC9 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
ZFYVE28Q9HCC9 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZFYVE28Q9HCC9 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ZFYVE28Q9HCC9 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZFYVE28Q9HCC9 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZFYVE28Q9HCC9 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZFYVE28Q9HCC9 NCF1C-201ENST00000438382 1427 ntBASIC20.44■□□□□ 0.86
ZFYVE28Q9HCC9 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.44■□□□□ 0.86
ZFYVE28Q9HCC9 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.44■□□□□ 0.86
ZFYVE28Q9HCC9 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.43■□□□□ 0.86
ZFYVE28Q9HCC9 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZFYVE28Q9HCC9 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
ZFYVE28Q9HCC9 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZFYVE28Q9HCC9 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
ZFYVE28Q9HCC9 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
ZFYVE28Q9HCC9 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ZFYVE28Q9HCC9 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZFYVE28Q9HCC9 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.43■□□□□ 0.86
ZFYVE28Q9HCC9 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.43■□□□□ 0.86
ZFYVE28Q9HCC9 BCRP1-201ENST00000444246 691 ntBASIC20.43■□□□□ 0.86
ZFYVE28Q9HCC9 ACTG1P14-201ENST00000446382 1122 ntBASIC20.43■□□□□ 0.86
ZFYVE28Q9HCC9 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC20.43■□□□□ 0.86
ZFYVE28Q9HCC9 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZFYVE28Q9HCC9 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.43■□□□□ 0.86
ZFYVE28Q9HCC9 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC20.43■□□□□ 0.86
ZFYVE28Q9HCC9 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
ZFYVE28Q9HCC9 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.43■□□□□ 0.86
ZFYVE28Q9HCC9 AC004449.1-201ENST00000564240 433 ntBASIC20.43■□□□□ 0.86
ZFYVE28Q9HCC9 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.43■□□□□ 0.86
ZFYVE28Q9HCC9 AL161938.1-201ENST00000569833 2180 ntBASIC20.43■□□□□ 0.86
ZFYVE28Q9HCC9 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZFYVE28Q9HCC9 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZFYVE28Q9HCC9 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
ZFYVE28Q9HCC9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZFYVE28Q9HCC9 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZFYVE28Q9HCC9 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ZFYVE28Q9HCC9 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
ZFYVE28Q9HCC9 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.42■□□□□ 0.86
ZFYVE28Q9HCC9 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZFYVE28Q9HCC9 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZFYVE28Q9HCC9 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
ZFYVE28Q9HCC9 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZFYVE28Q9HCC9 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
ZFYVE28Q9HCC9 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZFYVE28Q9HCC9 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms