Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LRTM1Q9HBL6 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRTM1Q9HBL6 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.33■□□□□ 0.37
LRTM1Q9HBL6 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
LRTM1Q9HBL6 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRTM1Q9HBL6 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
LRTM1Q9HBL6 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRTM1Q9HBL6 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.33■□□□□ 0.36
LRTM1Q9HBL6 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.33■□□□□ 0.36
LRTM1Q9HBL6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.33■□□□□ 0.36
LRTM1Q9HBL6 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRTM1Q9HBL6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.33■□□□□ 0.36
LRTM1Q9HBL6 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.33■□□□□ 0.36
LRTM1Q9HBL6 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
LRTM1Q9HBL6 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRTM1Q9HBL6 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
LRTM1Q9HBL6 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRTM1Q9HBL6 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRTM1Q9HBL6 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRTM1Q9HBL6 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRTM1Q9HBL6 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRTM1Q9HBL6 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRTM1Q9HBL6 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRTM1Q9HBL6 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.32■□□□□ 0.36
LRTM1Q9HBL6 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRTM1Q9HBL6 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRTM1Q9HBL6 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRTM1Q9HBL6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRTM1Q9HBL6 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRTM1Q9HBL6 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRTM1Q9HBL6 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LRTM1Q9HBL6 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
LRTM1Q9HBL6 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRTM1Q9HBL6 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRTM1Q9HBL6 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRTM1Q9HBL6 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.32■□□□□ 0.36
LRTM1Q9HBL6 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRTM1Q9HBL6 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRTM1Q9HBL6 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRTM1Q9HBL6 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.32■□□□□ 0.36
LRTM1Q9HBL6 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.32■□□□□ 0.36
LRTM1Q9HBL6 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
LRTM1Q9HBL6 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LRTM1Q9HBL6 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRTM1Q9HBL6 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRTM1Q9HBL6 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRTM1Q9HBL6 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRTM1Q9HBL6 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRTM1Q9HBL6 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRTM1Q9HBL6 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRTM1Q9HBL6 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRTM1Q9HBL6 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRTM1Q9HBL6 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRTM1Q9HBL6 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.32■□□□□ 0.36
LRTM1Q9HBL6 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LRTM1Q9HBL6 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRTM1Q9HBL6 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRTM1Q9HBL6 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRTM1Q9HBL6 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRTM1Q9HBL6 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRTM1Q9HBL6 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
LRTM1Q9HBL6 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
LRTM1Q9HBL6 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRTM1Q9HBL6 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.31■□□□□ 0.36
LRTM1Q9HBL6 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.31■□□□□ 0.36
LRTM1Q9HBL6 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRTM1Q9HBL6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRTM1Q9HBL6 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.31■□□□□ 0.36
LRTM1Q9HBL6 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRTM1Q9HBL6 AC022898.2-201ENST00000616822 1312 ntBASIC17.31■□□□□ 0.36
LRTM1Q9HBL6 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRTM1Q9HBL6 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRTM1Q9HBL6 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
LRTM1Q9HBL6 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRTM1Q9HBL6 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LRTM1Q9HBL6 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRTM1Q9HBL6 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.31■□□□□ 0.36
LRTM1Q9HBL6 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.31■□□□□ 0.36
LRTM1Q9HBL6 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.31■□□□□ 0.36
LRTM1Q9HBL6 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.31■□□□□ 0.36
LRTM1Q9HBL6 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
LRTM1Q9HBL6 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.31■□□□□ 0.36
LRTM1Q9HBL6 AC100803.2-201ENST00000562459 1963 ntBASIC17.31■□□□□ 0.36
LRTM1Q9HBL6 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LRTM1Q9HBL6 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRTM1Q9HBL6 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRTM1Q9HBL6 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRTM1Q9HBL6 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRTM1Q9HBL6 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRTM1Q9HBL6 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LRTM1Q9HBL6 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.31■□□□□ 0.36
LRTM1Q9HBL6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRTM1Q9HBL6 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRTM1Q9HBL6 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
LRTM1Q9HBL6 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
LRTM1Q9HBL6 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.31■□□□□ 0.36
LRTM1Q9HBL6 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRTM1Q9HBL6 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRTM1Q9HBL6 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.3■□□□□ 0.36
LRTM1Q9HBL6 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms