Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 AL024508.2-201ENST00000607749 1894 ntBASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.66■□□□□ 0.26
POLR2J3Q9H1A7 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
POLR2J3Q9H1A7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
POLR2J3Q9H1A7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
POLR2J3Q9H1A7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
POLR2J3Q9H1A7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
POLR2J3Q9H1A7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.66■□□□□ 0.26
POLR2J3Q9H1A7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
POLR2J3Q9H1A7 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
POLR2J3Q9H1A7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
POLR2J3Q9H1A7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
POLR2J3Q9H1A7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
POLR2J3Q9H1A7 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
POLR2J3Q9H1A7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.66■□□□□ 0.26
POLR2J3Q9H1A7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.66■□□□□ 0.26
POLR2J3Q9H1A7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.66■□□□□ 0.26
POLR2J3Q9H1A7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
POLR2J3Q9H1A7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.66■□□□□ 0.26
POLR2J3Q9H1A7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
POLR2J3Q9H1A7 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.66■□□□□ 0.26
POLR2J3Q9H1A7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.66■□□□□ 0.26
POLR2J3Q9H1A7 AC010240.3-201ENST00000607688 395 ntBASIC16.66■□□□□ 0.26
POLR2J3Q9H1A7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
POLR2J3Q9H1A7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
POLR2J3Q9H1A7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
POLR2J3Q9H1A7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
POLR2J3Q9H1A7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.66■□□□□ 0.26
POLR2J3Q9H1A7 LINC01126-201ENST00000623515 1646 ntBASIC16.66■□□□□ 0.26
POLR2J3Q9H1A7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.66■□□□□ 0.26
POLR2J3Q9H1A7 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
POLR2J3Q9H1A7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
POLR2J3Q9H1A7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.65■□□□□ 0.26
POLR2J3Q9H1A7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.65■□□□□ 0.26
POLR2J3Q9H1A7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
POLR2J3Q9H1A7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLR2J3Q9H1A7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.65■□□□□ 0.26
POLR2J3Q9H1A7 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
POLR2J3Q9H1A7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLR2J3Q9H1A7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
POLR2J3Q9H1A7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.65■□□□□ 0.26
POLR2J3Q9H1A7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLR2J3Q9H1A7 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLR2J3Q9H1A7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLR2J3Q9H1A7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
POLR2J3Q9H1A7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
POLR2J3Q9H1A7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.65■□□□□ 0.26
POLR2J3Q9H1A7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.65■□□□□ 0.26
POLR2J3Q9H1A7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.65■□□□□ 0.26
POLR2J3Q9H1A7 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
POLR2J3Q9H1A7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
POLR2J3Q9H1A7 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLR2J3Q9H1A7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLR2J3Q9H1A7 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLR2J3Q9H1A7 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLR2J3Q9H1A7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLR2J3Q9H1A7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.65■□□□□ 0.26
POLR2J3Q9H1A7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
POLR2J3Q9H1A7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.65■□□□□ 0.26
POLR2J3Q9H1A7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLR2J3Q9H1A7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
POLR2J3Q9H1A7 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
POLR2J3Q9H1A7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
POLR2J3Q9H1A7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLR2J3Q9H1A7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLR2J3Q9H1A7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
POLR2J3Q9H1A7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
POLR2J3Q9H1A7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
POLR2J3Q9H1A7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
POLR2J3Q9H1A7 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
POLR2J3Q9H1A7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
POLR2J3Q9H1A7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
POLR2J3Q9H1A7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.64■□□□□ 0.25
POLR2J3Q9H1A7 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
POLR2J3Q9H1A7 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.64■□□□□ 0.25
POLR2J3Q9H1A7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
POLR2J3Q9H1A7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
POLR2J3Q9H1A7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.64■□□□□ 0.25
POLR2J3Q9H1A7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.64■□□□□ 0.25
POLR2J3Q9H1A7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.64■□□□□ 0.25
POLR2J3Q9H1A7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.64■□□□□ 0.25
POLR2J3Q9H1A7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
POLR2J3Q9H1A7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.64■□□□□ 0.25
POLR2J3Q9H1A7 AP006294.2-201ENST00000641667 209 ntBASIC16.64■□□□□ 0.25
POLR2J3Q9H1A7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
POLR2J3Q9H1A7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
POLR2J3Q9H1A7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
POLR2J3Q9H1A7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
POLR2J3Q9H1A7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
POLR2J3Q9H1A7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
POLR2J3Q9H1A7 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.64■□□□□ 0.25
POLR2J3Q9H1A7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms