Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDH11XQ9BZA7 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC23.23■■□□□ 1.31
PCDH11XQ9BZA7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC23.23■■□□□ 1.31
PCDH11XQ9BZA7 DUTP2-201ENST00000519164 463 ntBASIC23.23■■□□□ 1.31
PCDH11XQ9BZA7 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC23.23■■□□□ 1.31
PCDH11XQ9BZA7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC23.23■■□□□ 1.31
PCDH11XQ9BZA7 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC23.23■■□□□ 1.31
PCDH11XQ9BZA7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC23.23■■□□□ 1.31
PCDH11XQ9BZA7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDH11XQ9BZA7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PCDH11XQ9BZA7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
PCDH11XQ9BZA7 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDH11XQ9BZA7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
PCDH11XQ9BZA7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDH11XQ9BZA7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
PCDH11XQ9BZA7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDH11XQ9BZA7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC23.22■■□□□ 1.31
PCDH11XQ9BZA7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC23.22■■□□□ 1.31
PCDH11XQ9BZA7 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDH11XQ9BZA7 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDH11XQ9BZA7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDH11XQ9BZA7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC23.22■■□□□ 1.31
PCDH11XQ9BZA7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC23.22■■□□□ 1.31
PCDH11XQ9BZA7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
PCDH11XQ9BZA7 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC23.22■■□□□ 1.31
PCDH11XQ9BZA7 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC23.22■■□□□ 1.31
PCDH11XQ9BZA7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC23.22■■□□□ 1.31
PCDH11XQ9BZA7 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC23.22■■□□□ 1.31
PCDH11XQ9BZA7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC23.22■■□□□ 1.31
PCDH11XQ9BZA7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
PCDH11XQ9BZA7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDH11XQ9BZA7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDH11XQ9BZA7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC23.22■■□□□ 1.31
PCDH11XQ9BZA7 AL031598.1-201ENST00000561511 1773 ntBASIC23.22■■□□□ 1.31
PCDH11XQ9BZA7 AC148477.5-201ENST00000625164 1645 ntBASIC23.22■■□□□ 1.31
PCDH11XQ9BZA7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC23.22■■□□□ 1.31
PCDH11XQ9BZA7 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDH11XQ9BZA7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PCDH11XQ9BZA7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDH11XQ9BZA7 AC022898.2-201ENST00000616822 1312 ntBASIC23.21■■□□□ 1.31
PCDH11XQ9BZA7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDH11XQ9BZA7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC23.21■■□□□ 1.31
PCDH11XQ9BZA7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDH11XQ9BZA7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
PCDH11XQ9BZA7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC23.21■■□□□ 1.31
PCDH11XQ9BZA7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC23.21■■□□□ 1.31
PCDH11XQ9BZA7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC23.21■■□□□ 1.31
PCDH11XQ9BZA7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC23.21■■□□□ 1.31
PCDH11XQ9BZA7 YBX1P5-201ENST00000509441 847 ntBASIC23.21■■□□□ 1.31
PCDH11XQ9BZA7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC23.21■■□□□ 1.31
PCDH11XQ9BZA7 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC23.21■■□□□ 1.31
PCDH11XQ9BZA7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC23.21■■□□□ 1.31
PCDH11XQ9BZA7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC23.21■■□□□ 1.31
PCDH11XQ9BZA7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PCDH11XQ9BZA7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PCDH11XQ9BZA7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
PCDH11XQ9BZA7 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PCDH11XQ9BZA7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC23.21■■□□□ 1.31
PCDH11XQ9BZA7 AC006504.4-201ENST00000592118 1568 ntBASIC23.21■■□□□ 1.31
PCDH11XQ9BZA7 SIRPAP1-201ENST00000448467 1770 ntBASIC23.2■■□□□ 1.31
PCDH11XQ9BZA7 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC23.2■■□□□ 1.31
PCDH11XQ9BZA7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
PCDH11XQ9BZA7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDH11XQ9BZA7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC23.2■■□□□ 1.3
PCDH11XQ9BZA7 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC23.2■■□□□ 1.3
PCDH11XQ9BZA7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC23.2■■□□□ 1.3
PCDH11XQ9BZA7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC23.2■■□□□ 1.3
PCDH11XQ9BZA7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDH11XQ9BZA7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDH11XQ9BZA7 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC23.2■■□□□ 1.3
PCDH11XQ9BZA7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDH11XQ9BZA7 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
PCDH11XQ9BZA7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
PCDH11XQ9BZA7 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC23.2■■□□□ 1.3
PCDH11XQ9BZA7 AC108073.2-201ENST00000464002 357 ntBASIC23.2■■□□□ 1.3
PCDH11XQ9BZA7 ALG1L5P-201ENST00000482043 771 ntBASIC23.2■■□□□ 1.3
PCDH11XQ9BZA7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC23.2■■□□□ 1.3
PCDH11XQ9BZA7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC23.2■■□□□ 1.3
PCDH11XQ9BZA7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDH11XQ9BZA7 AC132938.5-201ENST00000624980 1813 ntBASIC23.2■■□□□ 1.3
PCDH11XQ9BZA7 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDH11XQ9BZA7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDH11XQ9BZA7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDH11XQ9BZA7 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC23.2■■□□□ 1.3
PCDH11XQ9BZA7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDH11XQ9BZA7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDH11XQ9BZA7 NCF1C-201ENST00000438382 1427 ntBASIC23.19■■□□□ 1.3
PCDH11XQ9BZA7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC23.19■■□□□ 1.3
PCDH11XQ9BZA7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDH11XQ9BZA7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDH11XQ9BZA7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC23.19■■□□□ 1.3
PCDH11XQ9BZA7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDH11XQ9BZA7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC23.19■■□□□ 1.3
PCDH11XQ9BZA7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC23.19■■□□□ 1.3
PCDH11XQ9BZA7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC23.19■■□□□ 1.3
PCDH11XQ9BZA7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC23.19■■□□□ 1.3
PCDH11XQ9BZA7 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDH11XQ9BZA7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC23.19■■□□□ 1.3
PCDH11XQ9BZA7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDH11XQ9BZA7 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms