Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC005829.1-201ENST00000570002 483 ntBASIC21.76■■□□□ 1.07
RTFDC1Q9BY42 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC21.76■■□□□ 1.07
RTFDC1Q9BY42 AC004706.3-202ENST00000621574 984 ntBASIC21.76■■□□□ 1.07
RTFDC1Q9BY42 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RTFDC1Q9BY42 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RTFDC1Q9BY42 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTFDC1Q9BY42 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTFDC1Q9BY42 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTFDC1Q9BY42 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC21.75■■□□□ 1.07
RTFDC1Q9BY42 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.75■■□□□ 1.07
RTFDC1Q9BY42 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTFDC1Q9BY42 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RTFDC1Q9BY42 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
RTFDC1Q9BY42 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTFDC1Q9BY42 AC103564.2-201ENST00000432853 1299 ntBASIC21.75■■□□□ 1.07
RTFDC1Q9BY42 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC21.75■■□□□ 1.07
RTFDC1Q9BY42 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC21.75■■□□□ 1.07
RTFDC1Q9BY42 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RTFDC1Q9BY42 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTFDC1Q9BY42 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.75■■□□□ 1.07
RTFDC1Q9BY42 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTFDC1Q9BY42 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTFDC1Q9BY42 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC21.74■■□□□ 1.07
RTFDC1Q9BY42 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
RTFDC1Q9BY42 TCAP-202ENST00000578283 583 ntTSL 5 BASIC21.74■■□□□ 1.07
RTFDC1Q9BY42 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
RTFDC1Q9BY42 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC21.74■■□□□ 1.07
RTFDC1Q9BY42 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC21.74■■□□□ 1.07
RTFDC1Q9BY42 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTFDC1Q9BY42 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC21.74■■□□□ 1.07
RTFDC1Q9BY42 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.74■■□□□ 1.07
RTFDC1Q9BY42 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
RTFDC1Q9BY42 KRT18P28-201ENST00000453838 1332 ntBASIC21.74■■□□□ 1.07
RTFDC1Q9BY42 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTFDC1Q9BY42 KRT8P47-201ENST00000604727 1398 ntBASIC21.74■■□□□ 1.07
RTFDC1Q9BY42 AC002310.6-201ENST00000624451 1377 ntBASIC21.74■■□□□ 1.07
RTFDC1Q9BY42 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTFDC1Q9BY42 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTFDC1Q9BY42 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC21.73■■□□□ 1.07
RTFDC1Q9BY42 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
RTFDC1Q9BY42 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTFDC1Q9BY42 COX5BP2-201ENST00000392354 334 ntBASIC21.73■■□□□ 1.07
RTFDC1Q9BY42 PON3-205ENST00000451904 1053 ntTSL 3 BASIC21.73■■□□□ 1.07
RTFDC1Q9BY42 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC21.73■■□□□ 1.07
RTFDC1Q9BY42 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC21.73■■□□□ 1.07
RTFDC1Q9BY42 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTFDC1Q9BY42 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC21.73■■□□□ 1.07
RTFDC1Q9BY42 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC21.73■■□□□ 1.07
RTFDC1Q9BY42 AC073592.5-201ENST00000624854 528 ntBASIC21.73■■□□□ 1.07
RTFDC1Q9BY42 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC21.73■■□□□ 1.07
RTFDC1Q9BY42 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
RTFDC1Q9BY42 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
RTFDC1Q9BY42 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTFDC1Q9BY42 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RTFDC1Q9BY42 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.73■■□□□ 1.07
RTFDC1Q9BY42 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.72■■□□□ 1.07
RTFDC1Q9BY42 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTFDC1Q9BY42 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.72■■□□□ 1.07
RTFDC1Q9BY42 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
RTFDC1Q9BY42 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
RTFDC1Q9BY42 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC21.72■■□□□ 1.07
RTFDC1Q9BY42 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTFDC1Q9BY42 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC21.72■■□□□ 1.07
RTFDC1Q9BY42 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC21.72■■□□□ 1.07
RTFDC1Q9BY42 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC21.72■■□□□ 1.07
RTFDC1Q9BY42 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC21.72■■□□□ 1.07
RTFDC1Q9BY42 ARTN-206ENST00000472435 402 ntTSL 3 BASIC21.72■■□□□ 1.07
RTFDC1Q9BY42 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
RTFDC1Q9BY42 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC21.72■■□□□ 1.07
RTFDC1Q9BY42 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC21.72■■□□□ 1.07
RTFDC1Q9BY42 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTFDC1Q9BY42 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTFDC1Q9BY42 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RTFDC1Q9BY42 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
RTFDC1Q9BY42 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RTFDC1Q9BY42 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTFDC1Q9BY42 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTFDC1Q9BY42 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.72■■□□□ 1.07
RTFDC1Q9BY42 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.72■■□□□ 1.07
RTFDC1Q9BY42 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTFDC1Q9BY42 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RTFDC1Q9BY42 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.71■■□□□ 1.07
RTFDC1Q9BY42 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTFDC1Q9BY42 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
RTFDC1Q9BY42 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RTFDC1Q9BY42 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTFDC1Q9BY42 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RTFDC1Q9BY42 METTL26-205ENST00000397666 726 ntTSL 2 BASIC21.71■■□□□ 1.07
RTFDC1Q9BY42 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC21.71■■□□□ 1.07
RTFDC1Q9BY42 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC21.71■■□□□ 1.07
RTFDC1Q9BY42 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC21.71■■□□□ 1.07
RTFDC1Q9BY42 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RTFDC1Q9BY42 AC092865.6-201ENST00000642101 219 ntBASIC21.71■■□□□ 1.07
RTFDC1Q9BY42 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTFDC1Q9BY42 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTFDC1Q9BY42 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.71■■□□□ 1.07
RTFDC1Q9BY42 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTFDC1Q9BY42 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTFDC1Q9BY42 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
RTFDC1Q9BY42 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms