Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 TSPY22P-201ENST00000427496 604 ntBASIC12.55□□□□□ -0.4
UPK3BQ9BT76 HCG4P8-203ENST00000443049 980 ntBASIC12.55□□□□□ -0.4
UPK3BQ9BT76 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 PPOX-214ENST00000535223 664 ntTSL 3 BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 GPR32P1-201ENST00000601788 811 ntBASIC12.55□□□□□ -0.4
UPK3BQ9BT76 NPAP1P7-201ENST00000613027 823 ntBASIC12.55□□□□□ -0.4
UPK3BQ9BT76 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 AC099398.1-201ENST00000567919 2776 ntBASIC12.55□□□□□ -0.4
UPK3BQ9BT76 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UPK3BQ9BT76 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 IGHGP-201ENST00000390555 1178 ntBASIC12.54□□□□□ -0.4
UPK3BQ9BT76 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 AC113404.2-201ENST00000507884 177 ntBASIC12.54□□□□□ -0.4
UPK3BQ9BT76 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 AC090616.6-201ENST00000582640 721 ntBASIC12.54□□□□□ -0.4
UPK3BQ9BT76 AC005332.3-201ENST00000589904 676 ntBASIC12.54□□□□□ -0.4
UPK3BQ9BT76 TK1-205ENST00000590862 642 ntTSL 3 BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 AL390719.2-201ENST00000606993 987 ntBASIC12.54□□□□□ -0.4
UPK3BQ9BT76 GXYLT1P4-201ENST00000613576 1192 ntBASIC12.54□□□□□ -0.4
UPK3BQ9BT76 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 VPS72-207ENST00000640458 689 ntTSL 5 BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UPK3BQ9BT76 AC016734.2-201ENST00000624325 1377 ntBASIC12.54□□□□□ -0.4
UPK3BQ9BT76 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 Z83836.1-201ENST00000624605 1642 ntBASIC12.53□□□□□ -0.4
UPK3BQ9BT76 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 DDT-203ENST00000403754 569 ntTSL 3 BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 DDT-206ENST00000430101 573 ntTSL 2 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms