Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VRK1Q99986 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.91■□□□□ 0.14
VRK1Q99986 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
VRK1Q99986 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.91■□□□□ 0.14
VRK1Q99986 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VRK1Q99986 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.91■□□□□ 0.14
VRK1Q99986 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
VRK1Q99986 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.91■□□□□ 0.14
VRK1Q99986 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.91■□□□□ 0.14
VRK1Q99986 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VRK1Q99986 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.91■□□□□ 0.14
VRK1Q99986 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
VRK1Q99986 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VRK1Q99986 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.91■□□□□ 0.14
VRK1Q99986 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VRK1Q99986 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.91■□□□□ 0.14
VRK1Q99986 RASA4DP-201ENST00000460726 1199 ntBASIC15.91■□□□□ 0.14
VRK1Q99986 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.91■□□□□ 0.14
VRK1Q99986 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
VRK1Q99986 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.91■□□□□ 0.14
VRK1Q99986 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.91■□□□□ 0.14
VRK1Q99986 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
VRK1Q99986 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VRK1Q99986 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VRK1Q99986 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VRK1Q99986 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
VRK1Q99986 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
VRK1Q99986 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VRK1Q99986 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VRK1Q99986 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VRK1Q99986 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.9■□□□□ 0.14
VRK1Q99986 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
VRK1Q99986 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.9■□□□□ 0.14
VRK1Q99986 AC008556.1-201ENST00000610908 2040 ntBASIC15.9■□□□□ 0.14
VRK1Q99986 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VRK1Q99986 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
VRK1Q99986 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VRK1Q99986 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
VRK1Q99986 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.9■□□□□ 0.14
VRK1Q99986 AL139384.1-201ENST00000612143 3047 ntBASIC15.9■□□□□ 0.14
VRK1Q99986 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VRK1Q99986 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VRK1Q99986 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VRK1Q99986 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
VRK1Q99986 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VRK1Q99986 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VRK1Q99986 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VRK1Q99986 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VRK1Q99986 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
VRK1Q99986 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.9■□□□□ 0.14
VRK1Q99986 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
VRK1Q99986 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VRK1Q99986 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.9■□□□□ 0.14
VRK1Q99986 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.9■□□□□ 0.14
VRK1Q99986 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
VRK1Q99986 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VRK1Q99986 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VRK1Q99986 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.9■□□□□ 0.14
VRK1Q99986 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VRK1Q99986 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VRK1Q99986 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VRK1Q99986 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VRK1Q99986 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VRK1Q99986 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.9■□□□□ 0.14
VRK1Q99986 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VRK1Q99986 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC15.9■□□□□ 0.14
VRK1Q99986 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
VRK1Q99986 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VRK1Q99986 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VRK1Q99986 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VRK1Q99986 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VRK1Q99986 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
VRK1Q99986 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
VRK1Q99986 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
VRK1Q99986 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
VRK1Q99986 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
VRK1Q99986 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VRK1Q99986 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VRK1Q99986 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VRK1Q99986 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VRK1Q99986 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VRK1Q99986 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VRK1Q99986 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.89■□□□□ 0.13
VRK1Q99986 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VRK1Q99986 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.89■□□□□ 0.13
VRK1Q99986 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VRK1Q99986 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.89■□□□□ 0.13
VRK1Q99986 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.89■□□□□ 0.13
VRK1Q99986 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.89■□□□□ 0.13
VRK1Q99986 AC083849.1-201ENST00000615227 514 ntBASIC15.89■□□□□ 0.13
VRK1Q99986 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.89■□□□□ 0.13
VRK1Q99986 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.89■□□□□ 0.13
VRK1Q99986 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.89■□□□□ 0.13
VRK1Q99986 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.89■□□□□ 0.13
VRK1Q99986 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.89■□□□□ 0.13
VRK1Q99986 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
VRK1Q99986 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VRK1Q99986 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VRK1Q99986 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VRK1Q99986 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms