Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GAFA1Q96PS6 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GAFA1Q96PS6 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GAFA1Q96PS6 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GAFA1Q96PS6 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GAFA1Q96PS6 MTCL1P1-201ENST00000446207 792 ntBASIC14.97□□□□□ -0.01
GAFA1Q96PS6 TSSC2-201ENST00000450217 709 ntBASIC14.97□□□□□ -0.01
GAFA1Q96PS6 RN7SL606P-201ENST00000472779 293 ntBASIC14.97□□□□□ -0.01
GAFA1Q96PS6 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GAFA1Q96PS6 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.97□□□□□ -0.01
GAFA1Q96PS6 AC112698.1-201ENST00000510299 916 ntBASIC14.97□□□□□ -0.01
GAFA1Q96PS6 AC124864.1-201ENST00000623408 392 ntBASIC14.97□□□□□ -0.01
GAFA1Q96PS6 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
GAFA1Q96PS6 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.97□□□□□ -0.01
GAFA1Q96PS6 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GAFA1Q96PS6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC14.97□□□□□ -0.01
GAFA1Q96PS6 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GAFA1Q96PS6 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.97□□□□□ -0.01
GAFA1Q96PS6 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GAFA1Q96PS6 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GAFA1Q96PS6 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC14.97□□□□□ -0.01
GAFA1Q96PS6 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GAFA1Q96PS6 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GAFA1Q96PS6 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GAFA1Q96PS6 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
GAFA1Q96PS6 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
GAFA1Q96PS6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GAFA1Q96PS6 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
GAFA1Q96PS6 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
GAFA1Q96PS6 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GAFA1Q96PS6 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
GAFA1Q96PS6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GAFA1Q96PS6 AC008764.6-201ENST00000595909 2069 ntBASIC14.96□□□□□ -0.01
GAFA1Q96PS6 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC14.96□□□□□ -0.01
GAFA1Q96PS6 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
GAFA1Q96PS6 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GAFA1Q96PS6 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
GAFA1Q96PS6 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
GAFA1Q96PS6 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
GAFA1Q96PS6 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GAFA1Q96PS6 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GAFA1Q96PS6 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.96□□□□□ -0.01
GAFA1Q96PS6 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
GAFA1Q96PS6 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.96□□□□□ -0.01
GAFA1Q96PS6 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.96□□□□□ -0.01
GAFA1Q96PS6 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
GAFA1Q96PS6 AC069148.1-201ENST00000608741 768 ntBASIC14.96□□□□□ -0.01
GAFA1Q96PS6 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
GAFA1Q96PS6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GAFA1Q96PS6 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
GAFA1Q96PS6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GAFA1Q96PS6 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
GAFA1Q96PS6 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
GAFA1Q96PS6 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC14.96□□□□□ -0.01
GAFA1Q96PS6 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC14.96□□□□□ -0.01
GAFA1Q96PS6 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
GAFA1Q96PS6 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GAFA1Q96PS6 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GAFA1Q96PS6 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
GAFA1Q96PS6 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
GAFA1Q96PS6 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
GAFA1Q96PS6 KRT8P47-201ENST00000604727 1398 ntBASIC14.96□□□□□ -0.02
GAFA1Q96PS6 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
GAFA1Q96PS6 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
GAFA1Q96PS6 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.96□□□□□ -0.02
GAFA1Q96PS6 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
GAFA1Q96PS6 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.02
GAFA1Q96PS6 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.96□□□□□ -0.02
GAFA1Q96PS6 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
GAFA1Q96PS6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
GAFA1Q96PS6 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GAFA1Q96PS6 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GAFA1Q96PS6 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GAFA1Q96PS6 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GAFA1Q96PS6 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GAFA1Q96PS6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GAFA1Q96PS6 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GAFA1Q96PS6 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GAFA1Q96PS6 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.95□□□□□ -0.02
GAFA1Q96PS6 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GAFA1Q96PS6 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GAFA1Q96PS6 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.95□□□□□ -0.02
GAFA1Q96PS6 SLC25A6P5-201ENST00000435663 894 ntBASIC14.95□□□□□ -0.02
GAFA1Q96PS6 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
GAFA1Q96PS6 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GAFA1Q96PS6 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.95□□□□□ -0.02
GAFA1Q96PS6 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
GAFA1Q96PS6 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GAFA1Q96PS6 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.95□□□□□ -0.02
GAFA1Q96PS6 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GAFA1Q96PS6 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GAFA1Q96PS6 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
GAFA1Q96PS6 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GAFA1Q96PS6 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
GAFA1Q96PS6 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GAFA1Q96PS6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
GAFA1Q96PS6 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
GAFA1Q96PS6 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GAFA1Q96PS6 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GAFA1Q96PS6 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms