Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.05■□□□□ 0.64
ZNF558Q96NG5 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
ZNF558Q96NG5 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
ZNF558Q96NG5 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.05■□□□□ 0.64
ZNF558Q96NG5 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
ZNF558Q96NG5 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.05■□□□□ 0.64
ZNF558Q96NG5 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.05■□□□□ 0.64
ZNF558Q96NG5 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF558Q96NG5 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.05■□□□□ 0.64
ZNF558Q96NG5 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF558Q96NG5 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF558Q96NG5 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.04■□□□□ 0.64
ZNF558Q96NG5 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF558Q96NG5 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.04■□□□□ 0.64
ZNF558Q96NG5 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF558Q96NG5 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.04■□□□□ 0.64
ZNF558Q96NG5 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
ZNF558Q96NG5 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.04■□□□□ 0.64
ZNF558Q96NG5 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.04■□□□□ 0.64
ZNF558Q96NG5 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
ZNF558Q96NG5 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.04■□□□□ 0.64
ZNF558Q96NG5 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF558Q96NG5 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.04■□□□□ 0.64
ZNF558Q96NG5 YBX2P1-201ENST00000394192 760 ntBASIC19.04■□□□□ 0.64
ZNF558Q96NG5 RPSAP43-201ENST00000402237 625 ntBASIC19.04■□□□□ 0.64
ZNF558Q96NG5 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.04■□□□□ 0.64
ZNF558Q96NG5 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.04■□□□□ 0.64
ZNF558Q96NG5 GPX1P2-201ENST00000429271 606 ntBASIC19.04■□□□□ 0.64
ZNF558Q96NG5 AC009947.1-201ENST00000444350 727 ntBASIC19.04■□□□□ 0.64
ZNF558Q96NG5 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.04■□□□□ 0.64
ZNF558Q96NG5 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.04■□□□□ 0.64
ZNF558Q96NG5 PGM5P2-202ENST00000637225 1043 ntBASIC19.04■□□□□ 0.64
ZNF558Q96NG5 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
ZNF558Q96NG5 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF558Q96NG5 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF558Q96NG5 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
ZNF558Q96NG5 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF558Q96NG5 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF558Q96NG5 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF558Q96NG5 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF558Q96NG5 AC022898.2-201ENST00000616822 1312 ntBASIC19.03■□□□□ 0.64
ZNF558Q96NG5 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF558Q96NG5 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF558Q96NG5 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF558Q96NG5 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF558Q96NG5 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF558Q96NG5 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
ZNF558Q96NG5 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
ZNF558Q96NG5 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF558Q96NG5 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
ZNF558Q96NG5 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.03■□□□□ 0.64
ZNF558Q96NG5 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.03■□□□□ 0.64
ZNF558Q96NG5 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
ZNF558Q96NG5 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.03■□□□□ 0.64
ZNF558Q96NG5 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF558Q96NG5 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
ZNF558Q96NG5 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF558Q96NG5 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF558Q96NG5 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF558Q96NG5 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.03■□□□□ 0.64
ZNF558Q96NG5 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
ZNF558Q96NG5 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.03■□□□□ 0.64
ZNF558Q96NG5 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.03■□□□□ 0.64
ZNF558Q96NG5 AC103564.2-201ENST00000432853 1299 ntBASIC19.03■□□□□ 0.64
ZNF558Q96NG5 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.03■□□□□ 0.64
ZNF558Q96NG5 PRYP5-201ENST00000451909 266 ntBASIC19.03■□□□□ 0.64
ZNF558Q96NG5 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.03■□□□□ 0.64
ZNF558Q96NG5 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.03■□□□□ 0.64
ZNF558Q96NG5 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
ZNF558Q96NG5 AC005593.1-201ENST00000624894 515 ntBASIC19.03■□□□□ 0.64
ZNF558Q96NG5 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF558Q96NG5 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF558Q96NG5 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.03■□□□□ 0.64
ZNF558Q96NG5 KRT8P47-201ENST00000604727 1398 ntBASIC19.03■□□□□ 0.64
ZNF558Q96NG5 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF558Q96NG5 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
ZNF558Q96NG5 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF558Q96NG5 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.03■□□□□ 0.64
ZNF558Q96NG5 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ZNF558Q96NG5 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
ZNF558Q96NG5 SIGLEC16-201ENST00000599858 1437 ntBASIC19.02■□□□□ 0.64
ZNF558Q96NG5 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.02■□□□□ 0.64
ZNF558Q96NG5 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ZNF558Q96NG5 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ZNF558Q96NG5 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ZNF558Q96NG5 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.02■□□□□ 0.64
ZNF558Q96NG5 SPDYE21P-201ENST00000413323 827 ntBASIC19.02■□□□□ 0.64
ZNF558Q96NG5 KRT18P27-201ENST00000427733 1299 ntBASIC19.02■□□□□ 0.64
ZNF558Q96NG5 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ZNF558Q96NG5 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
ZNF558Q96NG5 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
ZNF558Q96NG5 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.02■□□□□ 0.64
ZNF558Q96NG5 AC126763.1-201ENST00000552015 2118 ntBASIC19.02■□□□□ 0.64
ZNF558Q96NG5 AL139424.1-201ENST00000607572 797 ntBASIC19.02■□□□□ 0.64
ZNF558Q96NG5 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
ZNF558Q96NG5 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.02■□□□□ 0.64
ZNF558Q96NG5 AC093010.1-201ENST00000473625 1624 ntBASIC19.02■□□□□ 0.64
ZNF558Q96NG5 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
ZNF558Q96NG5 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ZNF558Q96NG5 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms