Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE2Q96FN4 AC124067.4-201ENST00000519691 2379 ntBASIC15.67■□□□□ 0.1
CPNE2Q96FN4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.67■□□□□ 0.1
CPNE2Q96FN4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE2Q96FN4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.67■□□□□ 0.1
CPNE2Q96FN4 BX088651.1-201ENST00000540551 451 ntBASIC15.67■□□□□ 0.1
CPNE2Q96FN4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.67■□□□□ 0.1
CPNE2Q96FN4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.67■□□□□ 0.1
CPNE2Q96FN4 AC113410.3-201ENST00000623366 203 ntBASIC15.67■□□□□ 0.1
CPNE2Q96FN4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE2Q96FN4 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE2Q96FN4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.67■□□□□ 0.1
CPNE2Q96FN4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE2Q96FN4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE2Q96FN4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE2Q96FN4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE2Q96FN4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.67■□□□□ 0.1
CPNE2Q96FN4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE2Q96FN4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE2Q96FN4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE2Q96FN4 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CPNE2Q96FN4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE2Q96FN4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CPNE2Q96FN4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE2Q96FN4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE2Q96FN4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.67■□□□□ 0.1
CPNE2Q96FN4 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE2Q96FN4 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CPNE2Q96FN4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.67■□□□□ 0.1
CPNE2Q96FN4 SDHAP2-201ENST00000455183 2001 ntBASIC15.67■□□□□ 0.1
CPNE2Q96FN4 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE2Q96FN4 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
CPNE2Q96FN4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE2Q96FN4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE2Q96FN4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE2Q96FN4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE2Q96FN4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE2Q96FN4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE2Q96FN4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE2Q96FN4 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE2Q96FN4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.66■□□□□ 0.1
CPNE2Q96FN4 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE2Q96FN4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE2Q96FN4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CPNE2Q96FN4 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE2Q96FN4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE2Q96FN4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE2Q96FN4 MIR718-201ENST00000390190 70 ntBASIC15.66■□□□□ 0.1
CPNE2Q96FN4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.66■□□□□ 0.1
CPNE2Q96FN4 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.66■□□□□ 0.1
CPNE2Q96FN4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.66■□□□□ 0.1
CPNE2Q96FN4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE2Q96FN4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE2Q96FN4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CPNE2Q96FN4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE2Q96FN4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CPNE2Q96FN4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE2Q96FN4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE2Q96FN4 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE2Q96FN4 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
CPNE2Q96FN4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE2Q96FN4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE2Q96FN4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CPNE2Q96FN4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CPNE2Q96FN4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
CPNE2Q96FN4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE2Q96FN4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE2Q96FN4 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.65■□□□□ 0.1
CPNE2Q96FN4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.65■□□□□ 0.1
CPNE2Q96FN4 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE2Q96FN4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE2Q96FN4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE2Q96FN4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CPNE2Q96FN4 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE2Q96FN4 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.65■□□□□ 0.1
CPNE2Q96FN4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE2Q96FN4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE2Q96FN4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC15.65■□□□□ 0.1
CPNE2Q96FN4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE2Q96FN4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE2Q96FN4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CPNE2Q96FN4 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.65■□□□□ 0.1
CPNE2Q96FN4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.65■□□□□ 0.1
CPNE2Q96FN4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.65■□□□□ 0.1
CPNE2Q96FN4 AL353719.1-201ENST00000566847 864 ntBASIC15.65■□□□□ 0.1
CPNE2Q96FN4 AC116562.4-202ENST00000641738 218 ntBASIC15.65■□□□□ 0.1
CPNE2Q96FN4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
CPNE2Q96FN4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.65■□□□□ 0.1
CPNE2Q96FN4 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CPNE2Q96FN4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.65■□□□□ 0.1
CPNE2Q96FN4 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE2Q96FN4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.65■□□□□ 0.1
CPNE2Q96FN4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.65■□□□□ 0.1
CPNE2Q96FN4 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.65■□□□□ 0.1
CPNE2Q96FN4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE2Q96FN4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE2Q96FN4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE2Q96FN4 AC093010.1-201ENST00000473625 1624 ntBASIC15.65■□□□□ 0.1
CPNE2Q96FN4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
CPNE2Q96FN4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.64■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms