Protein–RNA interactions for Protein: Q96CG3

TIFA, TRAF-interacting protein with FHA domain-containing protein A, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIFAQ96CG3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TIFAQ96CG3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.17■□□□□ 0.66
TIFAQ96CG3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TIFAQ96CG3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TIFAQ96CG3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.17■□□□□ 0.66
TIFAQ96CG3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TIFAQ96CG3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TIFAQ96CG3 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TIFAQ96CG3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TIFAQ96CG3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TIFAQ96CG3 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TIFAQ96CG3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
TIFAQ96CG3 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.17■□□□□ 0.66
TIFAQ96CG3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.17■□□□□ 0.66
TIFAQ96CG3 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.17■□□□□ 0.66
TIFAQ96CG3 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.17■□□□□ 0.66
TIFAQ96CG3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.17■□□□□ 0.66
TIFAQ96CG3 AL589182.2-201ENST00000619332 1049 ntBASIC19.17■□□□□ 0.66
TIFAQ96CG3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.17■□□□□ 0.66
TIFAQ96CG3 AF228730.6-201ENST00000641497 218 ntBASIC19.17■□□□□ 0.66
TIFAQ96CG3 AC084121.3-201ENST00000641716 218 ntBASIC19.17■□□□□ 0.66
TIFAQ96CG3 AC105233.6-201ENST00000642093 218 ntBASIC19.17■□□□□ 0.66
TIFAQ96CG3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TIFAQ96CG3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.17■□□□□ 0.66
TIFAQ96CG3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.17■□□□□ 0.66
TIFAQ96CG3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TIFAQ96CG3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TIFAQ96CG3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TIFAQ96CG3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.16■□□□□ 0.66
TIFAQ96CG3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TIFAQ96CG3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TIFAQ96CG3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TIFAQ96CG3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TIFAQ96CG3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TIFAQ96CG3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TIFAQ96CG3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TIFAQ96CG3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TIFAQ96CG3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TIFAQ96CG3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TIFAQ96CG3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TIFAQ96CG3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.16■□□□□ 0.66
TIFAQ96CG3 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TIFAQ96CG3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TIFAQ96CG3 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.16■□□□□ 0.66
TIFAQ96CG3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.16■□□□□ 0.66
TIFAQ96CG3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
TIFAQ96CG3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.16■□□□□ 0.66
TIFAQ96CG3 AC005498.2-205ENST00000593218 784 ntBASIC19.16■□□□□ 0.66
TIFAQ96CG3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.16■□□□□ 0.66
TIFAQ96CG3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TIFAQ96CG3 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.16■□□□□ 0.66
TIFAQ96CG3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.16■□□□□ 0.66
TIFAQ96CG3 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TIFAQ96CG3 AC063926.2-201ENST00000623766 1308 ntBASIC19.16■□□□□ 0.66
TIFAQ96CG3 AL158211.5-201ENST00000623583 2518 ntBASIC19.16■□□□□ 0.66
TIFAQ96CG3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
TIFAQ96CG3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TIFAQ96CG3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TIFAQ96CG3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TIFAQ96CG3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TIFAQ96CG3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
TIFAQ96CG3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TIFAQ96CG3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.15■□□□□ 0.66
TIFAQ96CG3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TIFAQ96CG3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TIFAQ96CG3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TIFAQ96CG3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.15■□□□□ 0.66
TIFAQ96CG3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TIFAQ96CG3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TIFAQ96CG3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
TIFAQ96CG3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TIFAQ96CG3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TIFAQ96CG3 ELK2BP-201ENST00000415014 1224 ntBASIC19.15■□□□□ 0.66
TIFAQ96CG3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.15■□□□□ 0.66
TIFAQ96CG3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.15■□□□□ 0.66
TIFAQ96CG3 AC007967.3-201ENST00000434308 558 ntBASIC19.15■□□□□ 0.66
TIFAQ96CG3 ACTG1P14-201ENST00000446382 1122 ntBASIC19.15■□□□□ 0.66
TIFAQ96CG3 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.15■□□□□ 0.66
TIFAQ96CG3 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.15■□□□□ 0.66
TIFAQ96CG3 AC004835.2-201ENST00000603762 682 ntBASIC19.15■□□□□ 0.66
TIFAQ96CG3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TIFAQ96CG3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TIFAQ96CG3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.15■□□□□ 0.66
TIFAQ96CG3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TIFAQ96CG3 SDHAP2-201ENST00000455183 2001 ntBASIC19.15■□□□□ 0.66
TIFAQ96CG3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TIFAQ96CG3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
TIFAQ96CG3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.14■□□□□ 0.66
TIFAQ96CG3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.14■□□□□ 0.66
TIFAQ96CG3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.14■□□□□ 0.66
TIFAQ96CG3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TIFAQ96CG3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TIFAQ96CG3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TIFAQ96CG3 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TIFAQ96CG3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TIFAQ96CG3 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TIFAQ96CG3 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.14■□□□□ 0.65
TIFAQ96CG3 AC069262.1-201ENST00000539058 672 ntBASIC19.14■□□□□ 0.65
TIFAQ96CG3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.14■□□□□ 0.65
TIFAQ96CG3 PDPK2P-202ENST00000562415 1191 ntBASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms