Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2AF1L4Q8WU68 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2AF1L4Q8WU68 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
U2AF1L4Q8WU68 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
U2AF1L4Q8WU68 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2AF1L4Q8WU68 KRT8P32-201ENST00000512863 1461 ntBASIC20.55■□□□□ 0.88
U2AF1L4Q8WU68 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
U2AF1L4Q8WU68 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.55■□□□□ 0.88
U2AF1L4Q8WU68 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.54■□□□□ 0.88
U2AF1L4Q8WU68 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.54■□□□□ 0.88
U2AF1L4Q8WU68 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
U2AF1L4Q8WU68 AC112777.1-201ENST00000540175 1423 ntBASIC20.54■□□□□ 0.88
U2AF1L4Q8WU68 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
U2AF1L4Q8WU68 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
U2AF1L4Q8WU68 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
U2AF1L4Q8WU68 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.54■□□□□ 0.88
U2AF1L4Q8WU68 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.54■□□□□ 0.88
U2AF1L4Q8WU68 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
U2AF1L4Q8WU68 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
U2AF1L4Q8WU68 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
U2AF1L4Q8WU68 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.54■□□□□ 0.88
U2AF1L4Q8WU68 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
U2AF1L4Q8WU68 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.54■□□□□ 0.88
U2AF1L4Q8WU68 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.54■□□□□ 0.88
U2AF1L4Q8WU68 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC20.54■□□□□ 0.88
U2AF1L4Q8WU68 AC002347.1-201ENST00000569543 541 ntBASIC20.54■□□□□ 0.88
U2AF1L4Q8WU68 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.54■□□□□ 0.88
U2AF1L4Q8WU68 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
U2AF1L4Q8WU68 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
U2AF1L4Q8WU68 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
U2AF1L4Q8WU68 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
U2AF1L4Q8WU68 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
U2AF1L4Q8WU68 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
U2AF1L4Q8WU68 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
U2AF1L4Q8WU68 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
U2AF1L4Q8WU68 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
U2AF1L4Q8WU68 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.53■□□□□ 0.88
U2AF1L4Q8WU68 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
U2AF1L4Q8WU68 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
U2AF1L4Q8WU68 AL138781.2-201ENST00000617896 1843 ntBASIC20.53■□□□□ 0.88
U2AF1L4Q8WU68 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
U2AF1L4Q8WU68 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
U2AF1L4Q8WU68 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
U2AF1L4Q8WU68 AC211486.1-202ENST00000416371 468 ntBASIC20.53■□□□□ 0.88
U2AF1L4Q8WU68 METTL21AP1-201ENST00000438852 635 ntBASIC20.53■□□□□ 0.88
U2AF1L4Q8WU68 CYMP-203ENST00000474680 1263 ntBASIC20.53■□□□□ 0.88
U2AF1L4Q8WU68 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.53■□□□□ 0.88
U2AF1L4Q8WU68 AC211476.1-201ENST00000503899 468 ntBASIC20.53■□□□□ 0.88
U2AF1L4Q8WU68 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC20.53■□□□□ 0.88
U2AF1L4Q8WU68 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
U2AF1L4Q8WU68 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
U2AF1L4Q8WU68 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
U2AF1L4Q8WU68 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.53■□□□□ 0.88
U2AF1L4Q8WU68 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
U2AF1L4Q8WU68 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.53■□□□□ 0.88
U2AF1L4Q8WU68 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
U2AF1L4Q8WU68 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
U2AF1L4Q8WU68 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
U2AF1L4Q8WU68 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.53■□□□□ 0.88
U2AF1L4Q8WU68 AC138932.1-201ENST00000534164 6830 ntBASIC20.53■□□□□ 0.88
U2AF1L4Q8WU68 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.53■□□□□ 0.88
U2AF1L4Q8WU68 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
U2AF1L4Q8WU68 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
U2AF1L4Q8WU68 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
U2AF1L4Q8WU68 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.53■□□□□ 0.88
U2AF1L4Q8WU68 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
U2AF1L4Q8WU68 AP005117.1-201ENST00000584346 1413 ntBASIC20.53■□□□□ 0.88
U2AF1L4Q8WU68 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
U2AF1L4Q8WU68 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
U2AF1L4Q8WU68 FP475955.4-201ENST00000623131 1990 ntBASIC20.52■□□□□ 0.88
U2AF1L4Q8WU68 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
U2AF1L4Q8WU68 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
U2AF1L4Q8WU68 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.52■□□□□ 0.88
U2AF1L4Q8WU68 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.52■□□□□ 0.88
U2AF1L4Q8WU68 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
U2AF1L4Q8WU68 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
U2AF1L4Q8WU68 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.52■□□□□ 0.88
U2AF1L4Q8WU68 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
U2AF1L4Q8WU68 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
U2AF1L4Q8WU68 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.52■□□□□ 0.88
U2AF1L4Q8WU68 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.52■□□□□ 0.88
U2AF1L4Q8WU68 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC20.52■□□□□ 0.88
U2AF1L4Q8WU68 HTR5BP-201ENST00000430851 1154 ntBASIC20.52■□□□□ 0.88
U2AF1L4Q8WU68 AP006288.1-201ENST00000446065 395 ntBASIC20.52■□□□□ 0.88
U2AF1L4Q8WU68 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.52■□□□□ 0.88
U2AF1L4Q8WU68 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.52■□□□□ 0.88
U2AF1L4Q8WU68 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.52■□□□□ 0.88
U2AF1L4Q8WU68 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
U2AF1L4Q8WU68 IRX1P1-201ENST00000438849 1838 ntBASIC20.52■□□□□ 0.88
U2AF1L4Q8WU68 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
U2AF1L4Q8WU68 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
U2AF1L4Q8WU68 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
U2AF1L4Q8WU68 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
U2AF1L4Q8WU68 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
U2AF1L4Q8WU68 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
U2AF1L4Q8WU68 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
U2AF1L4Q8WU68 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
U2AF1L4Q8WU68 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.51■□□□□ 0.87
U2AF1L4Q8WU68 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.51■□□□□ 0.87
U2AF1L4Q8WU68 INTS4P1-201ENST00000438455 1935 ntBASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms