Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
CFAP43Q8NDM7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC27.96■■■□□ 2.07
CFAP43Q8NDM7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC27.96■■■□□ 2.07
CFAP43Q8NDM7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
CFAP43Q8NDM7 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC27.96■■■□□ 2.07
CFAP43Q8NDM7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
CFAP43Q8NDM7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC27.96■■■□□ 2.07
CFAP43Q8NDM7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC27.96■■■□□ 2.07
CFAP43Q8NDM7 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC27.96■■■□□ 2.07
CFAP43Q8NDM7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
CFAP43Q8NDM7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
CFAP43Q8NDM7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC27.96■■■□□ 2.07
CFAP43Q8NDM7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC27.96■■■□□ 2.07
CFAP43Q8NDM7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC27.96■■■□□ 2.07
CFAP43Q8NDM7 AC079776.2-201ENST00000641154 1609 ntBASIC27.96■■■□□ 2.07
CFAP43Q8NDM7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
CFAP43Q8NDM7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC27.96■■■□□ 2.07
CFAP43Q8NDM7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC27.96■■■□□ 2.07
CFAP43Q8NDM7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC27.96■■■□□ 2.07
CFAP43Q8NDM7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC27.96■■■□□ 2.07
CFAP43Q8NDM7 WIZP1-201ENST00000531444 2299 ntBASIC27.96■■■□□ 2.07
CFAP43Q8NDM7 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
CFAP43Q8NDM7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC27.95■■■□□ 2.07
CFAP43Q8NDM7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC27.95■■■□□ 2.07
CFAP43Q8NDM7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
CFAP43Q8NDM7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC27.95■■■□□ 2.07
CFAP43Q8NDM7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC27.95■■■□□ 2.07
CFAP43Q8NDM7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
CFAP43Q8NDM7 MIR1199-201ENST00000621445 119 ntBASIC27.95■■■□□ 2.07
CFAP43Q8NDM7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC27.95■■■□□ 2.07
CFAP43Q8NDM7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC27.95■■■□□ 2.06
CFAP43Q8NDM7 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
CFAP43Q8NDM7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC27.94■■■□□ 2.06
CFAP43Q8NDM7 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CFAP43Q8NDM7 CNN2P11-201ENST00000429351 262 ntBASIC27.94■■■□□ 2.06
CFAP43Q8NDM7 LHX6-205ENST00000464484 666 ntTSL 2 BASIC27.94■■■□□ 2.06
CFAP43Q8NDM7 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC27.94■■■□□ 2.06
CFAP43Q8NDM7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
CFAP43Q8NDM7 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC27.94■■■□□ 2.06
CFAP43Q8NDM7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC27.94■■■□□ 2.06
CFAP43Q8NDM7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC27.94■■■□□ 2.06
CFAP43Q8NDM7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CFAP43Q8NDM7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
CFAP43Q8NDM7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CFAP43Q8NDM7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC27.94■■■□□ 2.06
CFAP43Q8NDM7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CFAP43Q8NDM7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC27.94■■■□□ 2.06
CFAP43Q8NDM7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC27.94■■■□□ 2.06
CFAP43Q8NDM7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC27.94■■■□□ 2.06
CFAP43Q8NDM7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC27.94■■■□□ 2.06
CFAP43Q8NDM7 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC27.94■■■□□ 2.06
CFAP43Q8NDM7 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC27.94■■■□□ 2.06
CFAP43Q8NDM7 MIR4469-201ENST00000583919 79 ntBASIC27.94■■■□□ 2.06
CFAP43Q8NDM7 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC27.94■■■□□ 2.06
CFAP43Q8NDM7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CFAP43Q8NDM7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC27.93■■■□□ 2.06
CFAP43Q8NDM7 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC27.93■■■□□ 2.06
CFAP43Q8NDM7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC27.93■■■□□ 2.06
CFAP43Q8NDM7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
CFAP43Q8NDM7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
CFAP43Q8NDM7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC27.93■■■□□ 2.06
CFAP43Q8NDM7 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
CFAP43Q8NDM7 AC096633.1-201ENST00000422446 749 ntBASIC27.93■■■□□ 2.06
CFAP43Q8NDM7 COX20P2-201ENST00000452636 358 ntBASIC27.93■■■□□ 2.06
CFAP43Q8NDM7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC27.93■■■□□ 2.06
CFAP43Q8NDM7 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC27.93■■■□□ 2.06
CFAP43Q8NDM7 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC27.93■■■□□ 2.06
CFAP43Q8NDM7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC27.93■■■□□ 2.06
CFAP43Q8NDM7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC27.93■■■□□ 2.06
CFAP43Q8NDM7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC27.93■■■□□ 2.06
CFAP43Q8NDM7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
CFAP43Q8NDM7 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
CFAP43Q8NDM7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
CFAP43Q8NDM7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC27.92■■■□□ 2.06
CFAP43Q8NDM7 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC27.92■■■□□ 2.06
CFAP43Q8NDM7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
CFAP43Q8NDM7 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
CFAP43Q8NDM7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
CFAP43Q8NDM7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC27.92■■■□□ 2.06
CFAP43Q8NDM7 PGM5P2-202ENST00000637225 1043 ntBASIC27.92■■■□□ 2.06
CFAP43Q8NDM7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
CFAP43Q8NDM7 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC27.92■■■□□ 2.06
CFAP43Q8NDM7 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC27.92■■■□□ 2.06
CFAP43Q8NDM7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC27.92■■■□□ 2.06
CFAP43Q8NDM7 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
CFAP43Q8NDM7 AC018445.3-201ENST00000624177 1945 ntBASIC27.92■■■□□ 2.06
CFAP43Q8NDM7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC27.91■■■□□ 2.06
CFAP43Q8NDM7 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
CFAP43Q8NDM7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
CFAP43Q8NDM7 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
CFAP43Q8NDM7 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC27.91■■■□□ 2.06
CFAP43Q8NDM7 MKNK2P1-201ENST00000437526 628 ntBASIC27.91■■■□□ 2.06
CFAP43Q8NDM7 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC27.91■■■□□ 2.06
CFAP43Q8NDM7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC27.91■■■□□ 2.06
CFAP43Q8NDM7 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
CFAP43Q8NDM7 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC27.91■■■□□ 2.06
CFAP43Q8NDM7 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC27.91■■■□□ 2.06
CFAP43Q8NDM7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC27.91■■■□□ 2.06
CFAP43Q8NDM7 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC27.91■■■□□ 2.06
CFAP43Q8NDM7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC27.91■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms