Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC65Q8IXS2 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC65Q8IXS2 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
CCDC65Q8IXS2 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC65Q8IXS2 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20■□□□□ 0.79
CCDC65Q8IXS2 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC65Q8IXS2 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20■□□□□ 0.79
CCDC65Q8IXS2 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
CCDC65Q8IXS2 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
CCDC65Q8IXS2 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC65Q8IXS2 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC65Q8IXS2 IGHGP-201ENST00000390555 1178 ntBASIC20■□□□□ 0.79
CCDC65Q8IXS2 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC65Q8IXS2 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20■□□□□ 0.79
CCDC65Q8IXS2 SAPCD2P2-201ENST00000431719 1174 ntBASIC20■□□□□ 0.79
CCDC65Q8IXS2 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC65Q8IXS2 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20■□□□□ 0.79
CCDC65Q8IXS2 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20■□□□□ 0.79
CCDC65Q8IXS2 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20■□□□□ 0.79
CCDC65Q8IXS2 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC65Q8IXS2 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC65Q8IXS2 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC65Q8IXS2 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC65Q8IXS2 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20■□□□□ 0.79
CCDC65Q8IXS2 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CCDC65Q8IXS2 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC65Q8IXS2 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC65Q8IXS2 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC65Q8IXS2 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC65Q8IXS2 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC65Q8IXS2 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CCDC65Q8IXS2 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC65Q8IXS2 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC65Q8IXS2 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CCDC65Q8IXS2 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC65Q8IXS2 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC65Q8IXS2 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC65Q8IXS2 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.99■□□□□ 0.79
CCDC65Q8IXS2 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.99■□□□□ 0.79
CCDC65Q8IXS2 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC65Q8IXS2 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.99■□□□□ 0.79
CCDC65Q8IXS2 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC65Q8IXS2 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC65Q8IXS2 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.99■□□□□ 0.79
CCDC65Q8IXS2 AC083849.1-201ENST00000615227 514 ntBASIC19.99■□□□□ 0.79
CCDC65Q8IXS2 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC65Q8IXS2 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC65Q8IXS2 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CCDC65Q8IXS2 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CCDC65Q8IXS2 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC65Q8IXS2 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CCDC65Q8IXS2 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC65Q8IXS2 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC65Q8IXS2 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC65Q8IXS2 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
CCDC65Q8IXS2 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC65Q8IXS2 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CCDC65Q8IXS2 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC65Q8IXS2 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
CCDC65Q8IXS2 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC65Q8IXS2 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CCDC65Q8IXS2 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CCDC65Q8IXS2 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC65Q8IXS2 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.98■□□□□ 0.79
CCDC65Q8IXS2 FAM210CP-201ENST00000445714 574 ntBASIC19.98■□□□□ 0.79
CCDC65Q8IXS2 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.98■□□□□ 0.79
CCDC65Q8IXS2 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.98■□□□□ 0.79
CCDC65Q8IXS2 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.98■□□□□ 0.79
CCDC65Q8IXS2 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.98■□□□□ 0.79
CCDC65Q8IXS2 GPR32P1-201ENST00000601788 811 ntBASIC19.98■□□□□ 0.79
CCDC65Q8IXS2 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC65Q8IXS2 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC65Q8IXS2 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC65Q8IXS2 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC65Q8IXS2 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC65Q8IXS2 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CCDC65Q8IXS2 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC65Q8IXS2 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC65Q8IXS2 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC65Q8IXS2 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CCDC65Q8IXS2 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC65Q8IXS2 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC65Q8IXS2 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CCDC65Q8IXS2 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC65Q8IXS2 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC65Q8IXS2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC65Q8IXS2 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC65Q8IXS2 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC65Q8IXS2 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CCDC65Q8IXS2 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC65Q8IXS2 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC65Q8IXS2 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC65Q8IXS2 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
CCDC65Q8IXS2 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC65Q8IXS2 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC65Q8IXS2 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC65Q8IXS2 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.97■□□□□ 0.79
CCDC65Q8IXS2 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC65Q8IXS2 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.97■□□□□ 0.79
CCDC65Q8IXS2 TSPY12P-201ENST00000421279 868 ntBASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms