Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CRLF3Q8IUI8 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CRLF3Q8IUI8 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CRLF3Q8IUI8 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.01■□□□□ 0.47
CRLF3Q8IUI8 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
CRLF3Q8IUI8 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CRLF3Q8IUI8 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
CRLF3Q8IUI8 CROCCP1-201ENST00000426910 5675 ntBASIC18.01■□□□□ 0.47
CRLF3Q8IUI8 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CRLF3Q8IUI8 AL023806.1-201ENST00000603994 1649 ntBASIC18.01■□□□□ 0.47
CRLF3Q8IUI8 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CRLF3Q8IUI8 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
CRLF3Q8IUI8 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CRLF3Q8IUI8 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CRLF3Q8IUI8 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CRLF3Q8IUI8 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CRLF3Q8IUI8 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CRLF3Q8IUI8 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18■□□□□ 0.47
CRLF3Q8IUI8 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CRLF3Q8IUI8 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CRLF3Q8IUI8 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CRLF3Q8IUI8 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CRLF3Q8IUI8 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18■□□□□ 0.47
CRLF3Q8IUI8 KRT8P9-201ENST00000558927 1449 ntBASIC18■□□□□ 0.47
CRLF3Q8IUI8 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CRLF3Q8IUI8 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CRLF3Q8IUI8 AC084018.2-201ENST00000613093 2607 ntBASIC18■□□□□ 0.47
CRLF3Q8IUI8 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CRLF3Q8IUI8 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18■□□□□ 0.47
CRLF3Q8IUI8 AL390955.1-201ENST00000428694 934 ntBASIC18■□□□□ 0.47
CRLF3Q8IUI8 AC091390.4-202ENST00000476426 537 ntBASIC18■□□□□ 0.47
CRLF3Q8IUI8 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CRLF3Q8IUI8 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
CRLF3Q8IUI8 AC012306.2-201ENST00000609350 630 ntBASIC18■□□□□ 0.47
CRLF3Q8IUI8 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18■□□□□ 0.47
CRLF3Q8IUI8 MIR6786-201ENST00000616843 113 ntBASIC18■□□□□ 0.47
CRLF3Q8IUI8 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18■□□□□ 0.47
CRLF3Q8IUI8 AC097493.4-201ENST00000641197 219 ntBASIC18■□□□□ 0.47
CRLF3Q8IUI8 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CRLF3Q8IUI8 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18■□□□□ 0.47
CRLF3Q8IUI8 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
CRLF3Q8IUI8 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18■□□□□ 0.47
CRLF3Q8IUI8 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CRLF3Q8IUI8 FSCN1P1-201ENST00000568912 1481 ntBASIC18■□□□□ 0.47
CRLF3Q8IUI8 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CRLF3Q8IUI8 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18■□□□□ 0.47
CRLF3Q8IUI8 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18■□□□□ 0.47
CRLF3Q8IUI8 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18■□□□□ 0.47
CRLF3Q8IUI8 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CRLF3Q8IUI8 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CRLF3Q8IUI8 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
CRLF3Q8IUI8 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CRLF3Q8IUI8 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.99■□□□□ 0.47
CRLF3Q8IUI8 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CRLF3Q8IUI8 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CRLF3Q8IUI8 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CRLF3Q8IUI8 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
CRLF3Q8IUI8 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CRLF3Q8IUI8 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CRLF3Q8IUI8 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CRLF3Q8IUI8 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CRLF3Q8IUI8 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.99■□□□□ 0.47
CRLF3Q8IUI8 MESTP1-201ENST00000404287 994 ntBASIC17.99■□□□□ 0.47
CRLF3Q8IUI8 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.99■□□□□ 0.47
CRLF3Q8IUI8 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.99■□□□□ 0.47
CRLF3Q8IUI8 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.99■□□□□ 0.47
CRLF3Q8IUI8 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.99■□□□□ 0.47
CRLF3Q8IUI8 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.99■□□□□ 0.47
CRLF3Q8IUI8 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CRLF3Q8IUI8 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CRLF3Q8IUI8 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CRLF3Q8IUI8 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CRLF3Q8IUI8 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CRLF3Q8IUI8 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CRLF3Q8IUI8 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CRLF3Q8IUI8 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CRLF3Q8IUI8 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CRLF3Q8IUI8 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CRLF3Q8IUI8 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CRLF3Q8IUI8 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CRLF3Q8IUI8 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CRLF3Q8IUI8 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CRLF3Q8IUI8 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CRLF3Q8IUI8 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CRLF3Q8IUI8 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CRLF3Q8IUI8 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CRLF3Q8IUI8 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CRLF3Q8IUI8 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CRLF3Q8IUI8 MIR564-202ENST00000385049 94 ntBASIC17.98■□□□□ 0.47
CRLF3Q8IUI8 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.98■□□□□ 0.47
CRLF3Q8IUI8 B3GAT3P1-201ENST00000471720 806 ntBASIC17.98■□□□□ 0.47
CRLF3Q8IUI8 AC011506.1-201ENST00000474329 610 ntBASIC17.98■□□□□ 0.47
CRLF3Q8IUI8 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
CRLF3Q8IUI8 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.98■□□□□ 0.47
CRLF3Q8IUI8 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.98■□□□□ 0.47
CRLF3Q8IUI8 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CRLF3Q8IUI8 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.98■□□□□ 0.47
CRLF3Q8IUI8 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.98■□□□□ 0.47
CRLF3Q8IUI8 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.98■□□□□ 0.47
CRLF3Q8IUI8 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms