Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
DENND4AQ7Z401 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DENND4AQ7Z401 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DENND4AQ7Z401 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.4■□□□□ 0.54
DENND4AQ7Z401 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DENND4AQ7Z401 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DENND4AQ7Z401 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.4■□□□□ 0.54
DENND4AQ7Z401 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
DENND4AQ7Z401 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.4■□□□□ 0.54
DENND4AQ7Z401 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
DENND4AQ7Z401 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
DENND4AQ7Z401 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.39■□□□□ 0.54
DENND4AQ7Z401 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
DENND4AQ7Z401 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.39■□□□□ 0.54
DENND4AQ7Z401 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.39■□□□□ 0.54
DENND4AQ7Z401 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.39■□□□□ 0.54
DENND4AQ7Z401 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
DENND4AQ7Z401 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.39■□□□□ 0.54
DENND4AQ7Z401 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DENND4AQ7Z401 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DENND4AQ7Z401 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DENND4AQ7Z401 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
DENND4AQ7Z401 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DENND4AQ7Z401 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.39■□□□□ 0.53
DENND4AQ7Z401 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.39■□□□□ 0.53
DENND4AQ7Z401 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DENND4AQ7Z401 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DENND4AQ7Z401 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
DENND4AQ7Z401 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
DENND4AQ7Z401 IGLL3P-201ENST00000412472 434 ntBASIC18.39■□□□□ 0.53
DENND4AQ7Z401 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
DENND4AQ7Z401 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.39■□□□□ 0.53
DENND4AQ7Z401 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
DENND4AQ7Z401 AC004706.3-202ENST00000621574 984 ntBASIC18.39■□□□□ 0.53
DENND4AQ7Z401 AC073592.5-201ENST00000624854 528 ntBASIC18.39■□□□□ 0.53
DENND4AQ7Z401 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DENND4AQ7Z401 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DENND4AQ7Z401 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.39■□□□□ 0.53
DENND4AQ7Z401 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DENND4AQ7Z401 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.38■□□□□ 0.53
DENND4AQ7Z401 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DENND4AQ7Z401 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DENND4AQ7Z401 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
DENND4AQ7Z401 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DENND4AQ7Z401 KRT18P28-201ENST00000453838 1332 ntBASIC18.38■□□□□ 0.53
DENND4AQ7Z401 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.38■□□□□ 0.53
DENND4AQ7Z401 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.38■□□□□ 0.53
DENND4AQ7Z401 AC011467.4-201ENST00000594891 528 ntBASIC18.38■□□□□ 0.53
DENND4AQ7Z401 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
DENND4AQ7Z401 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
DENND4AQ7Z401 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.38■□□□□ 0.53
DENND4AQ7Z401 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.38■□□□□ 0.53
DENND4AQ7Z401 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.37■□□□□ 0.53
DENND4AQ7Z401 GMCL1P1-201ENST00000463439 1581 ntBASIC18.37■□□□□ 0.53
DENND4AQ7Z401 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.37■□□□□ 0.53
DENND4AQ7Z401 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
DENND4AQ7Z401 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DENND4AQ7Z401 AL035633.1-201ENST00000406139 838 ntBASIC18.37■□□□□ 0.53
DENND4AQ7Z401 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DENND4AQ7Z401 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.37■□□□□ 0.53
DENND4AQ7Z401 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.37■□□□□ 0.53
DENND4AQ7Z401 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
DENND4AQ7Z401 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DENND4AQ7Z401 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DENND4AQ7Z401 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
DENND4AQ7Z401 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DENND4AQ7Z401 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
DENND4AQ7Z401 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.37■□□□□ 0.53
DENND4AQ7Z401 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DENND4AQ7Z401 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
DENND4AQ7Z401 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DENND4AQ7Z401 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
DENND4AQ7Z401 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.37■□□□□ 0.53
DENND4AQ7Z401 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.37■□□□□ 0.53
DENND4AQ7Z401 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.37■□□□□ 0.53
DENND4AQ7Z401 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DENND4AQ7Z401 RPS15P9-201ENST00000494093 319 ntBASIC18.37■□□□□ 0.53
DENND4AQ7Z401 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.37■□□□□ 0.53
DENND4AQ7Z401 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.37■□□□□ 0.53
DENND4AQ7Z401 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DENND4AQ7Z401 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.37■□□□□ 0.53
DENND4AQ7Z401 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.37■□□□□ 0.53
DENND4AQ7Z401 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.37■□□□□ 0.53
DENND4AQ7Z401 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DENND4AQ7Z401 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DENND4AQ7Z401 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DENND4AQ7Z401 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DENND4AQ7Z401 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.36■□□□□ 0.53
DENND4AQ7Z401 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DENND4AQ7Z401 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DENND4AQ7Z401 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DENND4AQ7Z401 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DENND4AQ7Z401 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.36■□□□□ 0.53
DENND4AQ7Z401 AL645939.2-201ENST00000427340 991 ntBASIC18.36■□□□□ 0.53
DENND4AQ7Z401 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.36■□□□□ 0.53
DENND4AQ7Z401 AC103564.2-201ENST00000432853 1299 ntBASIC18.36■□□□□ 0.53
DENND4AQ7Z401 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.36■□□□□ 0.53
DENND4AQ7Z401 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.36■□□□□ 0.53
DENND4AQ7Z401 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
DENND4AQ7Z401 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms