Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT39Q6A163 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT39Q6A163 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KRT39Q6A163 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT39Q6A163 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.45■□□□□ 0.7
KRT39Q6A163 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.45■□□□□ 0.7
KRT39Q6A163 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.45■□□□□ 0.7
KRT39Q6A163 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT39Q6A163 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
KRT39Q6A163 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.44■□□□□ 0.7
KRT39Q6A163 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.44■□□□□ 0.7
KRT39Q6A163 AC100803.2-201ENST00000562459 1963 ntBASIC19.44■□□□□ 0.7
KRT39Q6A163 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.44■□□□□ 0.7
KRT39Q6A163 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT39Q6A163 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KRT39Q6A163 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.44■□□□□ 0.7
KRT39Q6A163 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KRT39Q6A163 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KRT39Q6A163 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT39Q6A163 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT39Q6A163 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT39Q6A163 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KRT39Q6A163 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.44■□□□□ 0.7
KRT39Q6A163 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.44■□□□□ 0.7
KRT39Q6A163 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.44■□□□□ 0.7
KRT39Q6A163 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.44■□□□□ 0.7
KRT39Q6A163 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KRT39Q6A163 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
KRT39Q6A163 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT39Q6A163 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT39Q6A163 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT39Q6A163 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.44■□□□□ 0.7
KRT39Q6A163 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
KRT39Q6A163 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
KRT39Q6A163 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT39Q6A163 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KRT39Q6A163 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT39Q6A163 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT39Q6A163 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
KRT39Q6A163 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.44■□□□□ 0.7
KRT39Q6A163 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KRT39Q6A163 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT39Q6A163 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT39Q6A163 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT39Q6A163 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
KRT39Q6A163 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT39Q6A163 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
KRT39Q6A163 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT39Q6A163 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.43■□□□□ 0.7
KRT39Q6A163 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
KRT39Q6A163 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
KRT39Q6A163 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.43■□□□□ 0.7
KRT39Q6A163 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
KRT39Q6A163 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KRT39Q6A163 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT39Q6A163 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT39Q6A163 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT39Q6A163 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT39Q6A163 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
KRT39Q6A163 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KRT39Q6A163 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.42■□□□□ 0.7
KRT39Q6A163 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.42■□□□□ 0.7
KRT39Q6A163 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KRT39Q6A163 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
KRT39Q6A163 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
KRT39Q6A163 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT39Q6A163 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT39Q6A163 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT39Q6A163 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
KRT39Q6A163 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.42■□□□□ 0.7
KRT39Q6A163 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KRT39Q6A163 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT39Q6A163 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.42■□□□□ 0.7
KRT39Q6A163 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.42■□□□□ 0.7
KRT39Q6A163 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.42■□□□□ 0.7
KRT39Q6A163 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.42■□□□□ 0.7
KRT39Q6A163 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.42■□□□□ 0.7
KRT39Q6A163 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.42■□□□□ 0.7
KRT39Q6A163 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.42■□□□□ 0.7
KRT39Q6A163 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KRT39Q6A163 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT39Q6A163 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.42■□□□□ 0.7
KRT39Q6A163 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT39Q6A163 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT39Q6A163 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT39Q6A163 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
KRT39Q6A163 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.42■□□□□ 0.7
KRT39Q6A163 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KRT39Q6A163 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KRT39Q6A163 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT39Q6A163 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT39Q6A163 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT39Q6A163 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT39Q6A163 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT39Q6A163 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT39Q6A163 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
KRT39Q6A163 AC134043.2-201ENST00000624206 2238 ntBASIC19.41■□□□□ 0.7
KRT39Q6A163 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.41■□□□□ 0.7
KRT39Q6A163 AC067852.2-201ENST00000590513 2313 ntBASIC19.41■□□□□ 0.7
KRT39Q6A163 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms