Protein–RNA interactions for Protein: Q68CZ1

RPGRIP1L, Protein fantom, humanhuman

Predictions only

Length 1,315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1LQ68CZ1 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC25.33■■□□□ 1.64
RPGRIP1LQ68CZ1 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RPGRIP1LQ68CZ1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
RPGRIP1LQ68CZ1 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC25.32■■□□□ 1.64
RPGRIP1LQ68CZ1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RPGRIP1LQ68CZ1 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC25.32■■□□□ 1.64
RPGRIP1LQ68CZ1 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC25.32■■□□□ 1.64
RPGRIP1LQ68CZ1 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC25.32■■□□□ 1.64
RPGRIP1LQ68CZ1 AC003669.1-201ENST00000334569 611 ntBASIC25.32■■□□□ 1.64
RPGRIP1LQ68CZ1 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC25.32■■□□□ 1.64
RPGRIP1LQ68CZ1 MIR3687-2-201ENST00000577708 61 ntBASIC25.32■■□□□ 1.64
RPGRIP1LQ68CZ1 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC25.32■■□□□ 1.64
RPGRIP1LQ68CZ1 AP001160.2-201ENST00000596071 487 ntBASIC25.32■■□□□ 1.64
RPGRIP1LQ68CZ1 MIR3687-1-201ENST00000614492 61 ntBASIC25.32■■□□□ 1.64
RPGRIP1LQ68CZ1 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC25.32■■□□□ 1.64
RPGRIP1LQ68CZ1 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC25.32■■□□□ 1.64
RPGRIP1LQ68CZ1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
RPGRIP1LQ68CZ1 AC148477.5-201ENST00000625164 1645 ntBASIC25.32■■□□□ 1.64
RPGRIP1LQ68CZ1 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RPGRIP1LQ68CZ1 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RPGRIP1LQ68CZ1 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
RPGRIP1LQ68CZ1 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC25.31■■□□□ 1.64
RPGRIP1LQ68CZ1 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC25.31■■□□□ 1.64
RPGRIP1LQ68CZ1 NCF1C-201ENST00000438382 1427 ntBASIC25.31■■□□□ 1.64
RPGRIP1LQ68CZ1 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RPGRIP1LQ68CZ1 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC25.31■■□□□ 1.64
RPGRIP1LQ68CZ1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
RPGRIP1LQ68CZ1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC25.31■■□□□ 1.64
RPGRIP1LQ68CZ1 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RPGRIP1LQ68CZ1 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC25.31■■□□□ 1.64
RPGRIP1LQ68CZ1 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
RPGRIP1LQ68CZ1 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RPGRIP1LQ68CZ1 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC25.31■■□□□ 1.64
RPGRIP1LQ68CZ1 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
RPGRIP1LQ68CZ1 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RPGRIP1LQ68CZ1 ELK2BP-201ENST00000415014 1224 ntBASIC25.31■■□□□ 1.64
RPGRIP1LQ68CZ1 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RPGRIP1LQ68CZ1 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC25.31■■□□□ 1.64
RPGRIP1LQ68CZ1 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC25.31■■□□□ 1.64
RPGRIP1LQ68CZ1 DHDH-204ENST00000523250 634 ntTSL 5 BASIC25.31■■□□□ 1.64
RPGRIP1LQ68CZ1 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC25.31■■□□□ 1.64
RPGRIP1LQ68CZ1 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC25.31■■□□□ 1.64
RPGRIP1LQ68CZ1 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
RPGRIP1LQ68CZ1 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC25.31■■□□□ 1.64
RPGRIP1LQ68CZ1 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RPGRIP1LQ68CZ1 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RPGRIP1LQ68CZ1 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RPGRIP1LQ68CZ1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC25.3■■□□□ 1.64
RPGRIP1LQ68CZ1 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
RPGRIP1LQ68CZ1 FUT8-AS1-201ENST00000621019 1521 ntBASIC25.3■■□□□ 1.64
RPGRIP1LQ68CZ1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RPGRIP1LQ68CZ1 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC25.3■■□□□ 1.64
RPGRIP1LQ68CZ1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC25.3■■□□□ 1.64
RPGRIP1LQ68CZ1 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
RPGRIP1LQ68CZ1 COA5-202ENST00000409997 557 ntTSL 4 BASIC25.3■■□□□ 1.64
RPGRIP1LQ68CZ1 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC25.3■■□□□ 1.64
RPGRIP1LQ68CZ1 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC25.3■■□□□ 1.64
RPGRIP1LQ68CZ1 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC25.3■■□□□ 1.64
RPGRIP1LQ68CZ1 TCAP-202ENST00000578283 583 ntTSL 5 BASIC25.3■■□□□ 1.64
RPGRIP1LQ68CZ1 MTDHP5-201ENST00000598980 586 ntBASIC25.3■■□□□ 1.64
RPGRIP1LQ68CZ1 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC25.3■■□□□ 1.64
RPGRIP1LQ68CZ1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
RPGRIP1LQ68CZ1 GID4-202ENST00000376345 1391 ntTSL 3 BASIC25.3■■□□□ 1.64
RPGRIP1LQ68CZ1 AL096828.2-201ENST00000567259 1965 ntBASIC25.3■■□□□ 1.64
RPGRIP1LQ68CZ1 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RPGRIP1LQ68CZ1 AC006504.4-201ENST00000592118 1568 ntBASIC25.29■■□□□ 1.64
RPGRIP1LQ68CZ1 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RPGRIP1LQ68CZ1 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
RPGRIP1LQ68CZ1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC25.29■■□□□ 1.64
RPGRIP1LQ68CZ1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RPGRIP1LQ68CZ1 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
RPGRIP1LQ68CZ1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RPGRIP1LQ68CZ1 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RPGRIP1LQ68CZ1 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC25.29■■□□□ 1.64
RPGRIP1LQ68CZ1 MCCD1P2-201ENST00000423228 335 ntBASIC25.29■■□□□ 1.64
RPGRIP1LQ68CZ1 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC25.29■■□□□ 1.64
RPGRIP1LQ68CZ1 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC25.29■■□□□ 1.64
RPGRIP1LQ68CZ1 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC25.29■■□□□ 1.64
RPGRIP1LQ68CZ1 COX5A-206ENST00000568783 571 ntTSL 3 BASIC25.29■■□□□ 1.64
RPGRIP1LQ68CZ1 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC25.29■■□□□ 1.64
RPGRIP1LQ68CZ1 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC25.29■■□□□ 1.64
RPGRIP1LQ68CZ1 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RPGRIP1LQ68CZ1 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RPGRIP1LQ68CZ1 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC25.29■■□□□ 1.64
RPGRIP1LQ68CZ1 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC25.28■■□□□ 1.64
RPGRIP1LQ68CZ1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC25.28■■□□□ 1.64
RPGRIP1LQ68CZ1 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
RPGRIP1LQ68CZ1 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
RPGRIP1LQ68CZ1 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC25.28■■□□□ 1.64
RPGRIP1LQ68CZ1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
RPGRIP1LQ68CZ1 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC25.28■■□□□ 1.64
RPGRIP1LQ68CZ1 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RPGRIP1LQ68CZ1 KRT18P2-201ENST00000447938 1258 ntBASIC25.28■■□□□ 1.64
RPGRIP1LQ68CZ1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
RPGRIP1LQ68CZ1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RPGRIP1LQ68CZ1 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC25.28■■□□□ 1.64
RPGRIP1LQ68CZ1 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RPGRIP1LQ68CZ1 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC25.28■■□□□ 1.64
RPGRIP1LQ68CZ1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC25.28■■□□□ 1.64
RPGRIP1LQ68CZ1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms