Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RPS3AP61247 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.91■□□□□ 0.3
RPS3AP61247 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPS3AP61247 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
RPS3AP61247 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.91■□□□□ 0.3
RPS3AP61247 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPS3AP61247 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RPS3AP61247 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RPS3AP61247 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.9■□□□□ 0.3
RPS3AP61247 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPS3AP61247 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPS3AP61247 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RPS3AP61247 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RPS3AP61247 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RPS3AP61247 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPS3AP61247 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
RPS3AP61247 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.9■□□□□ 0.3
RPS3AP61247 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.9■□□□□ 0.3
RPS3AP61247 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPS3AP61247 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.9■□□□□ 0.3
RPS3AP61247 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RPS3AP61247 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPS3AP61247 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPS3AP61247 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPS3AP61247 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPS3AP61247 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPS3AP61247 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RPS3AP61247 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
RPS3AP61247 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
RPS3AP61247 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
RPS3AP61247 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.9■□□□□ 0.3
RPS3AP61247 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.9■□□□□ 0.3
RPS3AP61247 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.9■□□□□ 0.3
RPS3AP61247 AC141257.4-201ENST00000634557 245 ntBASIC16.9■□□□□ 0.3
RPS3AP61247 AC136944.6-201ENST00000634818 245 ntBASIC16.9■□□□□ 0.3
RPS3AP61247 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPS3AP61247 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPS3AP61247 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPS3AP61247 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPS3AP61247 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPS3AP61247 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.9■□□□□ 0.3
RPS3AP61247 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPS3AP61247 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
RPS3AP61247 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPS3AP61247 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RPS3AP61247 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPS3AP61247 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RPS3AP61247 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPS3AP61247 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.89■□□□□ 0.29
RPS3AP61247 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RPS3AP61247 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPS3AP61247 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPS3AP61247 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.89■□□□□ 0.29
RPS3AP61247 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
RPS3AP61247 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RPS3AP61247 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPS3AP61247 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPS3AP61247 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RPS3AP61247 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.89■□□□□ 0.29
RPS3AP61247 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RPS3AP61247 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.89■□□□□ 0.29
RPS3AP61247 AL138966.2-201ENST00000621997 464 ntBASIC16.89■□□□□ 0.29
RPS3AP61247 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
RPS3AP61247 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RPS3AP61247 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RPS3AP61247 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
RPS3AP61247 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPS3AP61247 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.89■□□□□ 0.29
RPS3AP61247 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RPS3AP61247 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RPS3AP61247 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RPS3AP61247 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPS3AP61247 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPS3AP61247 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS3AP61247 GNAS-203ENST00000306120 1878 ntBASIC16.88■□□□□ 0.29
RPS3AP61247 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS3AP61247 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS3AP61247 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.88■□□□□ 0.29
RPS3AP61247 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RPS3AP61247 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RPS3AP61247 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS3AP61247 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RPS3AP61247 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS3AP61247 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.88■□□□□ 0.29
RPS3AP61247 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RPS3AP61247 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RPS3AP61247 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.88■□□□□ 0.29
RPS3AP61247 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS3AP61247 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS3AP61247 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RPS3AP61247 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.88■□□□□ 0.29
RPS3AP61247 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS3AP61247 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS3AP61247 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS3AP61247 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RPS3AP61247 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS3AP61247 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
RPS3AP61247 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
RPS3AP61247 COX11P1-201ENST00000489116 835 ntBASIC16.88■□□□□ 0.29
RPS3AP61247 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms