Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH13P55290 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH13P55290 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.63■□□□□ 0.41
CDH13P55290 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH13P55290 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.63■□□□□ 0.41
CDH13P55290 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.63■□□□□ 0.41
CDH13P55290 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH13P55290 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.63■□□□□ 0.41
CDH13P55290 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH13P55290 FAM87A-204ENST00000613235 858 ntBASIC17.63■□□□□ 0.41
CDH13P55290 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.63■□□□□ 0.41
CDH13P55290 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.63■□□□□ 0.41
CDH13P55290 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.63■□□□□ 0.41
CDH13P55290 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH13P55290 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH13P55290 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH13P55290 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CDH13P55290 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.63■□□□□ 0.41
CDH13P55290 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH13P55290 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CDH13P55290 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH13P55290 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH13P55290 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH13P55290 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CDH13P55290 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH13P55290 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH13P55290 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CDH13P55290 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.62■□□□□ 0.41
CDH13P55290 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.62■□□□□ 0.41
CDH13P55290 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.62■□□□□ 0.41
CDH13P55290 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.62■□□□□ 0.41
CDH13P55290 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH13P55290 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.62■□□□□ 0.41
CDH13P55290 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CDH13P55290 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.62■□□□□ 0.41
CDH13P55290 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.62■□□□□ 0.41
CDH13P55290 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.62■□□□□ 0.41
CDH13P55290 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDH13P55290 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.62■□□□□ 0.41
CDH13P55290 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.62■□□□□ 0.41
CDH13P55290 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.62■□□□□ 0.41
CDH13P55290 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.62■□□□□ 0.41
CDH13P55290 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.62■□□□□ 0.41
CDH13P55290 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH13P55290 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.62■□□□□ 0.41
CDH13P55290 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDH13P55290 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.62■□□□□ 0.41
CDH13P55290 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH13P55290 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH13P55290 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CDH13P55290 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.62■□□□□ 0.41
CDH13P55290 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDH13P55290 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDH13P55290 AC141586.5-201ENST00000624546 2050 ntBASIC17.62■□□□□ 0.41
CDH13P55290 AC108860.2-201ENST00000562760 2183 ntBASIC17.62■□□□□ 0.41
CDH13P55290 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH13P55290 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.62■□□□□ 0.41
CDH13P55290 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CDH13P55290 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH13P55290 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDH13P55290 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH13P55290 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.61■□□□□ 0.41
CDH13P55290 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDH13P55290 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CDH13P55290 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDH13P55290 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH13P55290 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.61■□□□□ 0.41
CDH13P55290 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CDH13P55290 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
CDH13P55290 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CDH13P55290 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.61■□□□□ 0.41
CDH13P55290 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDH13P55290 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH13P55290 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CDH13P55290 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.61■□□□□ 0.41
CDH13P55290 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.61■□□□□ 0.41
CDH13P55290 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.61■□□□□ 0.41
CDH13P55290 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CDH13P55290 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.61■□□□□ 0.41
CDH13P55290 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH13P55290 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDH13P55290 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH13P55290 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.61■□□□□ 0.41
CDH13P55290 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.61■□□□□ 0.41
CDH13P55290 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CDH13P55290 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
CDH13P55290 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH13P55290 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDH13P55290 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDH13P55290 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDH13P55290 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH13P55290 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CDH13P55290 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.61■□□□□ 0.41
CDH13P55290 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
CDH13P55290 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
CDH13P55290 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CDH13P55290 AL355312.1-201ENST00000407115 2176 ntBASIC17.6■□□□□ 0.41
CDH13P55290 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH13P55290 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.6■□□□□ 0.41
CDH13P55290 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms