Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC005082.1-201ENST00000413042 2259 ntBASIC17.47■□□□□ 0.39
PDX1P52945 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.47■□□□□ 0.39
PDX1P52945 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDX1P52945 AC020763.4-201ENST00000623414 4170 ntBASIC17.47■□□□□ 0.39
PDX1P52945 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDX1P52945 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.46■□□□□ 0.39
PDX1P52945 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PDX1P52945 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDX1P52945 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.46■□□□□ 0.39
PDX1P52945 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDX1P52945 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PDX1P52945 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.46■□□□□ 0.39
PDX1P52945 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.46■□□□□ 0.39
PDX1P52945 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDX1P52945 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDX1P52945 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDX1P52945 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDX1P52945 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDX1P52945 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDX1P52945 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
PDX1P52945 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.46■□□□□ 0.39
PDX1P52945 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDX1P52945 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDX1P52945 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.46■□□□□ 0.39
PDX1P52945 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.46■□□□□ 0.39
PDX1P52945 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.46■□□□□ 0.39
PDX1P52945 MIR149-201ENST00000384879 89 ntBASIC17.46■□□□□ 0.39
PDX1P52945 MIR574-201ENST00000385209 96 ntBASIC17.46■□□□□ 0.39
PDX1P52945 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDX1P52945 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PDX1P52945 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PDX1P52945 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PDX1P52945 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
PDX1P52945 AL031284.1-201ENST00000419297 478 ntBASIC17.46■□□□□ 0.39
PDX1P52945 PMS2P1-201ENST00000431037 1228 ntBASIC17.46■□□□□ 0.39
PDX1P52945 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDX1P52945 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.46■□□□□ 0.39
PDX1P52945 AC113404.2-201ENST00000507884 177 ntBASIC17.46■□□□□ 0.39
PDX1P52945 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.46■□□□□ 0.39
PDX1P52945 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.46■□□□□ 0.39
PDX1P52945 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.46■□□□□ 0.39
PDX1P52945 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
PDX1P52945 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PDX1P52945 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.46■□□□□ 0.39
PDX1P52945 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PDX1P52945 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.46■□□□□ 0.39
PDX1P52945 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.46■□□□□ 0.39
PDX1P52945 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PDX1P52945 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDX1P52945 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.46■□□□□ 0.39
PDX1P52945 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDX1P52945 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
PDX1P52945 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDX1P52945 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDX1P52945 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PDX1P52945 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
PDX1P52945 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.38
PDX1P52945 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
PDX1P52945 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDX1P52945 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDX1P52945 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
PDX1P52945 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDX1P52945 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.45■□□□□ 0.38
PDX1P52945 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDX1P52945 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDX1P52945 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.45■□□□□ 0.38
PDX1P52945 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PDX1P52945 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDX1P52945 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDX1P52945 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDX1P52945 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDX1P52945 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDX1P52945 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.45■□□□□ 0.38
PDX1P52945 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDX1P52945 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PDX1P52945 AC018712.1-201ENST00000455767 687 ntBASIC17.45■□□□□ 0.38
PDX1P52945 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
PDX1P52945 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.45■□□□□ 0.38
PDX1P52945 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.45■□□□□ 0.38
PDX1P52945 MIR7706-201ENST00000613747 67 ntBASIC17.45■□□□□ 0.38
PDX1P52945 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.45■□□□□ 0.38
PDX1P52945 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PDX1P52945 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDX1P52945 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDX1P52945 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PDX1P52945 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDX1P52945 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDX1P52945 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
PDX1P52945 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDX1P52945 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDX1P52945 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.45■□□□□ 0.38
PDX1P52945 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.45■□□□□ 0.38
PDX1P52945 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDX1P52945 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.45■□□□□ 0.38
PDX1P52945 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDX1P52945 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDX1P52945 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDX1P52945 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDX1P52945 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDX1P52945 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms