Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
SMARCA2P51531 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
SMARCA2P51531 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
SMARCA2P51531 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
SMARCA2P51531 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC31.74■■■□□ 2.67
SMARCA2P51531 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
SMARCA2P51531 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
SMARCA2P51531 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC31.74■■■□□ 2.67
SMARCA2P51531 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
SMARCA2P51531 AC003669.1-201ENST00000334569 611 ntBASIC31.73■■■□□ 2.67
SMARCA2P51531 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC31.73■■■□□ 2.67
SMARCA2P51531 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC31.73■■■□□ 2.67
SMARCA2P51531 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC31.73■■■□□ 2.67
SMARCA2P51531 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
SMARCA2P51531 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
SMARCA2P51531 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC31.73■■■□□ 2.67
SMARCA2P51531 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC31.73■■■□□ 2.67
SMARCA2P51531 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC31.73■■■□□ 2.67
SMARCA2P51531 AP002414.1-201ENST00000391405 1147 ntBASIC31.73■■■□□ 2.67
SMARCA2P51531 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC31.73■■■□□ 2.67
SMARCA2P51531 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC31.73■■■□□ 2.67
SMARCA2P51531 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC31.73■■■□□ 2.67
SMARCA2P51531 AJ011932.1-201ENST00000621707 465 ntBASIC31.73■■■□□ 2.67
SMARCA2P51531 Z92544.3-201ENST00000624747 417 ntBASIC31.73■■■□□ 2.67
SMARCA2P51531 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC31.72■■■□□ 2.67
SMARCA2P51531 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
SMARCA2P51531 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
SMARCA2P51531 FUT8-AS1-201ENST00000621019 1521 ntBASIC31.72■■■□□ 2.67
SMARCA2P51531 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC31.72■■■□□ 2.67
SMARCA2P51531 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
SMARCA2P51531 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC31.72■■■□□ 2.67
SMARCA2P51531 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC31.72■■■□□ 2.67
SMARCA2P51531 COBL-210ENST00000632460 1941 ntTSL 5 BASIC31.72■■■□□ 2.67
SMARCA2P51531 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC31.72■■■□□ 2.67
SMARCA2P51531 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC31.72■■■□□ 2.67
SMARCA2P51531 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC31.72■■■□□ 2.67
SMARCA2P51531 COPE-202ENST00000349893 948 ntTSL 2 BASIC31.72■■■□□ 2.67
SMARCA2P51531 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
SMARCA2P51531 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC31.72■■■□□ 2.67
SMARCA2P51531 AC009093.7-201ENST00000623853 1223 ntBASIC31.72■■■□□ 2.67
SMARCA2P51531 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
SMARCA2P51531 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC31.71■■■□□ 2.67
SMARCA2P51531 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC31.71■■■□□ 2.67
SMARCA2P51531 AC007952.6-201ENST00000573168 2673 ntBASIC31.71■■■□□ 2.67
SMARCA2P51531 AC003957.1-201ENST00000625108 2673 ntBASIC31.71■■■□□ 2.67
SMARCA2P51531 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
SMARCA2P51531 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
SMARCA2P51531 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
SMARCA2P51531 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC31.71■■■□□ 2.67
SMARCA2P51531 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
SMARCA2P51531 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
SMARCA2P51531 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
SMARCA2P51531 AC138761.1-201ENST00000584393 385 ntBASIC31.71■■■□□ 2.67
SMARCA2P51531 AC105339.1-204ENST00000636249 355 ntBASIC31.71■■■□□ 2.67
SMARCA2P51531 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC31.71■■■□□ 2.67
SMARCA2P51531 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
SMARCA2P51531 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC31.7■■■□□ 2.67
SMARCA2P51531 USP39-202ENST00000409025 1946 ntTSL 5 BASIC31.7■■■□□ 2.67
SMARCA2P51531 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.67
SMARCA2P51531 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.67
SMARCA2P51531 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
SMARCA2P51531 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC31.7■■■□□ 2.67
SMARCA2P51531 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC31.7■■■□□ 2.67
SMARCA2P51531 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC31.7■■■□□ 2.67
SMARCA2P51531 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC31.7■■■□□ 2.67
SMARCA2P51531 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC31.7■■■□□ 2.67
SMARCA2P51531 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC31.7■■■□□ 2.66
SMARCA2P51531 AL049757.1-201ENST00000616842 1596 ntBASIC31.7■■■□□ 2.66
SMARCA2P51531 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
SMARCA2P51531 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
SMARCA2P51531 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC31.69■■■□□ 2.66
SMARCA2P51531 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
SMARCA2P51531 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC31.69■■■□□ 2.66
SMARCA2P51531 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC31.69■■■□□ 2.66
SMARCA2P51531 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
SMARCA2P51531 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC31.69■■■□□ 2.66
SMARCA2P51531 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
SMARCA2P51531 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC31.69■■■□□ 2.66
SMARCA2P51531 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC31.69■■■□□ 2.66
SMARCA2P51531 AL390955.2-201ENST00000603032 514 ntBASIC31.69■■■□□ 2.66
SMARCA2P51531 AC019129.2-201ENST00000609837 1235 ntBASIC31.69■■■□□ 2.66
SMARCA2P51531 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC31.69■■■□□ 2.66
SMARCA2P51531 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC31.69■■■□□ 2.66
SMARCA2P51531 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC31.69■■■□□ 2.66
SMARCA2P51531 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
SMARCA2P51531 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC31.69■■■□□ 2.66
SMARCA2P51531 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
SMARCA2P51531 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
SMARCA2P51531 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
SMARCA2P51531 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
SMARCA2P51531 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC31.69■■■□□ 2.66
SMARCA2P51531 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
SMARCA2P51531 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC31.68■■■□□ 2.66
SMARCA2P51531 COX5BP2-201ENST00000392354 334 ntBASIC31.68■■■□□ 2.66
SMARCA2P51531 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC31.68■■■□□ 2.66
SMARCA2P51531 PCDHAC2-203ENST00000615316 3011 ntBASIC31.68■■■□□ 2.66
SMARCA2P51531 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
SMARCA2P51531 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC31.68■■■□□ 2.66
SMARCA2P51531 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
SMARCA2P51531 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms