Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PDE6BP35913 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PDE6BP35913 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
PDE6BP35913 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC22.09■■□□□ 1.13
PDE6BP35913 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
PDE6BP35913 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC22.08■■□□□ 1.13
PDE6BP35913 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC22.08■■□□□ 1.13
PDE6BP35913 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC22.08■■□□□ 1.13
PDE6BP35913 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC22.08■■□□□ 1.13
PDE6BP35913 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC22.08■■□□□ 1.13
PDE6BP35913 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PDE6BP35913 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC22.08■■□□□ 1.13
PDE6BP35913 ELK2BP-201ENST00000415014 1224 ntBASIC22.08■■□□□ 1.13
PDE6BP35913 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC22.08■■□□□ 1.13
PDE6BP35913 PRSS29P-201ENST00000440800 595 ntBASIC22.08■■□□□ 1.13
PDE6BP35913 HCG4B-203ENST00000450128 991 ntBASIC22.08■■□□□ 1.13
PDE6BP35913 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
PDE6BP35913 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
PDE6BP35913 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC22.08■■□□□ 1.12
PDE6BP35913 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC22.08■■□□□ 1.12
PDE6BP35913 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC22.08■■□□□ 1.12
PDE6BP35913 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
PDE6BP35913 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
PDE6BP35913 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
PDE6BP35913 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC22.08■■□□□ 1.12
PDE6BP35913 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PDE6BP35913 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PDE6BP35913 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC22.07■■□□□ 1.12
PDE6BP35913 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PDE6BP35913 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PDE6BP35913 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PDE6BP35913 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PDE6BP35913 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PDE6BP35913 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC22.07■■□□□ 1.12
PDE6BP35913 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
PDE6BP35913 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC22.07■■□□□ 1.12
PDE6BP35913 PNMT-202ENST00000394246 821 ntTSL 2 BASIC22.07■■□□□ 1.12
PDE6BP35913 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC22.07■■□□□ 1.12
PDE6BP35913 NKTR-203ENST00000442970 646 ntTSL 2 BASIC22.07■■□□□ 1.12
PDE6BP35913 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC22.07■■□□□ 1.12
PDE6BP35913 PON3-205ENST00000451904 1053 ntTSL 3 BASIC22.07■■□□□ 1.12
PDE6BP35913 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC22.07■■□□□ 1.12
PDE6BP35913 MAL2-202ENST00000531508 892 ntTSL 3 BASIC22.07■■□□□ 1.12
PDE6BP35913 AC018845.2-201ENST00000568326 409 ntBASIC22.07■■□□□ 1.12
PDE6BP35913 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC22.07■■□□□ 1.12
PDE6BP35913 ELL2P1-201ENST00000413990 1906 ntBASIC22.07■■□□□ 1.12
PDE6BP35913 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PDE6BP35913 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC22.07■■□□□ 1.12
PDE6BP35913 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PDE6BP35913 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
PDE6BP35913 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC22.07■■□□□ 1.12
PDE6BP35913 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PDE6BP35913 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC22.07■■□□□ 1.12
PDE6BP35913 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
PDE6BP35913 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PDE6BP35913 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC22.06■■□□□ 1.12
PDE6BP35913 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PDE6BP35913 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PDE6BP35913 CD82-202ENST00000342935 967 ntTSL 5 BASIC22.06■■□□□ 1.12
PDE6BP35913 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
PDE6BP35913 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PDE6BP35913 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
PDE6BP35913 IGHV3-65-201ENST00000523210 341 ntBASIC22.06■■□□□ 1.12
PDE6BP35913 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC22.06■■□□□ 1.12
PDE6BP35913 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC22.06■■□□□ 1.12
PDE6BP35913 AC008667.4-201ENST00000607370 168 ntBASIC22.06■■□□□ 1.12
PDE6BP35913 AL513190.1-201ENST00000621254 727 ntBASIC22.06■■□□□ 1.12
PDE6BP35913 ORC5-208ENST00000626700 344 ntTSL 3 BASIC22.06■■□□□ 1.12
PDE6BP35913 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PDE6BP35913 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC22.06■■□□□ 1.12
PDE6BP35913 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PDE6BP35913 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC22.06■■□□□ 1.12
PDE6BP35913 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
PDE6BP35913 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC22.06■■□□□ 1.12
PDE6BP35913 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PDE6BP35913 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
PDE6BP35913 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PDE6BP35913 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
PDE6BP35913 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
PDE6BP35913 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC22.05■■□□□ 1.12
PDE6BP35913 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC22.05■■□□□ 1.12
PDE6BP35913 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC22.05■■□□□ 1.12
PDE6BP35913 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PDE6BP35913 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PDE6BP35913 COX5BP2-201ENST00000392354 334 ntBASIC22.05■■□□□ 1.12
PDE6BP35913 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC22.05■■□□□ 1.12
PDE6BP35913 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC22.05■■□□□ 1.12
PDE6BP35913 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC22.05■■□□□ 1.12
PDE6BP35913 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PDE6BP35913 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC22.05■■□□□ 1.12
PDE6BP35913 CYB561-217ENST00000582997 877 ntTSL 5 BASIC22.05■■□□□ 1.12
PDE6BP35913 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC22.05■■□□□ 1.12
PDE6BP35913 AC092364.2-202ENST00000597012 1073 ntBASIC22.05■■□□□ 1.12
PDE6BP35913 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
PDE6BP35913 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PDE6BP35913 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
PDE6BP35913 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC22.05■■□□□ 1.12
PDE6BP35913 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
PDE6BP35913 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
PDE6BP35913 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC22.05■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms