Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.09■□□□□ 0.33
PTPN6P29350 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.09■□□□□ 0.33
PTPN6P29350 AC009065.1-201ENST00000564055 1225 ntBASIC17.09■□□□□ 0.33
PTPN6P29350 AL049597.2-201ENST00000565575 961 ntBASIC17.09■□□□□ 0.33
PTPN6P29350 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.09■□□□□ 0.33
PTPN6P29350 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN6P29350 AC010240.3-201ENST00000607688 395 ntBASIC17.09■□□□□ 0.33
PTPN6P29350 AC139887.4-201ENST00000607877 719 ntBASIC17.09■□□□□ 0.33
PTPN6P29350 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.09■□□□□ 0.33
PTPN6P29350 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN6P29350 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN6P29350 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.09■□□□□ 0.33
PTPN6P29350 AC100803.2-201ENST00000562459 1963 ntBASIC17.09■□□□□ 0.33
PTPN6P29350 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.09■□□□□ 0.33
PTPN6P29350 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN6P29350 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.09■□□□□ 0.33
PTPN6P29350 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN6P29350 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PTPN6P29350 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.09■□□□□ 0.33
PTPN6P29350 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN6P29350 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN6P29350 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN6P29350 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.09■□□□□ 0.33
PTPN6P29350 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTPN6P29350 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.08■□□□□ 0.33
PTPN6P29350 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PTPN6P29350 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
PTPN6P29350 PRORSD1P-202ENST00000563365 2154 ntBASIC17.08■□□□□ 0.33
PTPN6P29350 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
PTPN6P29350 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.08■□□□□ 0.33
PTPN6P29350 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTPN6P29350 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTPN6P29350 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTPN6P29350 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.08■□□□□ 0.33
PTPN6P29350 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN6P29350 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN6P29350 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN6P29350 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN6P29350 AK4P3-201ENST00000418260 669 ntBASIC17.08■□□□□ 0.32
PTPN6P29350 AC009947.2-201ENST00000444014 672 ntBASIC17.08■□□□□ 0.32
PTPN6P29350 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN6P29350 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN6P29350 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.08■□□□□ 0.32
PTPN6P29350 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.08■□□□□ 0.32
PTPN6P29350 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.08■□□□□ 0.32
PTPN6P29350 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.08■□□□□ 0.32
PTPN6P29350 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN6P29350 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN6P29350 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN6P29350 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN6P29350 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN6P29350 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN6P29350 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
PTPN6P29350 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN6P29350 AL355312.1-201ENST00000407115 2176 ntBASIC17.08■□□□□ 0.32
PTPN6P29350 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN6P29350 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN6P29350 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.08■□□□□ 0.32
PTPN6P29350 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN6P29350 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN6P29350 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.07■□□□□ 0.32
PTPN6P29350 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN6P29350 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN6P29350 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.07■□□□□ 0.32
PTPN6P29350 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN6P29350 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN6P29350 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN6P29350 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.07■□□□□ 0.32
PTPN6P29350 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN6P29350 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN6P29350 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PTPN6P29350 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.07■□□□□ 0.32
PTPN6P29350 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PTPN6P29350 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN6P29350 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN6P29350 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PTPN6P29350 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.07■□□□□ 0.32
PTPN6P29350 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.07■□□□□ 0.32
PTPN6P29350 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN6P29350 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN6P29350 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN6P29350 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN6P29350 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN6P29350 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN6P29350 SEC1P-202ENST00000473944 940 ntBASIC17.07■□□□□ 0.32
PTPN6P29350 YBX1P2-201ENST00000489612 999 ntBASIC17.07■□□□□ 0.32
PTPN6P29350 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.07■□□□□ 0.32
PTPN6P29350 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN6P29350 NEK4P2-201ENST00000580004 1012 ntBASIC17.07■□□□□ 0.32
PTPN6P29350 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN6P29350 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
PTPN6P29350 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.07■□□□□ 0.32
PTPN6P29350 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN6P29350 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PTPN6P29350 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PTPN6P29350 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PTPN6P29350 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.07■□□□□ 0.32
PTPN6P29350 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN6P29350 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PTPN6P29350 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms