Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 PPP1R14BP3-201ENST00000509033 445 ntBASIC15.81■□□□□ 0.12
RAB3BP20337 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC15.81■□□□□ 0.12
RAB3BP20337 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB3BP20337 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.81■□□□□ 0.12
RAB3BP20337 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC15.81■□□□□ 0.12
RAB3BP20337 AL163051.1-201ENST00000569214 1512 ntBASIC15.81■□□□□ 0.12
RAB3BP20337 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB3BP20337 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC15.81■□□□□ 0.12
RAB3BP20337 IKBKGP1-201ENST00000612193 1073 ntBASIC15.81■□□□□ 0.12
RAB3BP20337 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.81■□□□□ 0.12
RAB3BP20337 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.81■□□□□ 0.12
RAB3BP20337 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB3BP20337 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB3BP20337 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB3BP20337 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB3BP20337 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB3BP20337 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB3BP20337 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB3BP20337 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB3BP20337 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB3BP20337 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB3BP20337 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB3BP20337 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB3BP20337 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB3BP20337 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB3BP20337 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB3BP20337 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.8■□□□□ 0.12
RAB3BP20337 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB3BP20337 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
RAB3BP20337 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RAB3BP20337 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB3BP20337 AL137784.2-201ENST00000607332 1000 ntBASIC15.8■□□□□ 0.12
RAB3BP20337 AC008622.2-201ENST00000617006 1229 ntBASIC15.8■□□□□ 0.12
RAB3BP20337 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB3BP20337 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RAB3BP20337 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB3BP20337 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
RAB3BP20337 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB3BP20337 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB3BP20337 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.8■□□□□ 0.12
RAB3BP20337 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RAB3BP20337 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB3BP20337 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB3BP20337 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB3BP20337 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RAB3BP20337 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
RAB3BP20337 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB3BP20337 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB3BP20337 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.79■□□□□ 0.12
RAB3BP20337 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB3BP20337 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB3BP20337 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.79■□□□□ 0.12
RAB3BP20337 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RAB3BP20337 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB3BP20337 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB3BP20337 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RAB3BP20337 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB3BP20337 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB3BP20337 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB3BP20337 AL023284.2-201ENST00000405850 579 ntBASIC15.79■□□□□ 0.12
RAB3BP20337 PPP1R14BP5-201ENST00000440334 435 ntBASIC15.79■□□□□ 0.12
RAB3BP20337 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC15.79■□□□□ 0.12
RAB3BP20337 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC15.79■□□□□ 0.12
RAB3BP20337 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RAB3BP20337 AC011298.2-201ENST00000617989 482 ntBASIC15.79■□□□□ 0.12
RAB3BP20337 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.79■□□□□ 0.12
RAB3BP20337 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
RAB3BP20337 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB3BP20337 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RAB3BP20337 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB3BP20337 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RAB3BP20337 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB3BP20337 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB3BP20337 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
RAB3BP20337 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB3BP20337 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB3BP20337 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB3BP20337 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB3BP20337 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB3BP20337 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB3BP20337 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB3BP20337 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB3BP20337 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB3BP20337 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
RAB3BP20337 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.78■□□□□ 0.12
RAB3BP20337 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAB3BP20337 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.78■□□□□ 0.12
RAB3BP20337 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAB3BP20337 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.78■□□□□ 0.12
RAB3BP20337 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.78■□□□□ 0.12
RAB3BP20337 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAB3BP20337 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAB3BP20337 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RAB3BP20337 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB3BP20337 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB3BP20337 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RAB3BP20337 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.78■□□□□ 0.12
RAB3BP20337 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.78■□□□□ 0.12
RAB3BP20337 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB3BP20337 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms