Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.74■□□□□ 0.27
TNFRSF1BP20333 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.74■□□□□ 0.27
TNFRSF1BP20333 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.74■□□□□ 0.27
TNFRSF1BP20333 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.74■□□□□ 0.27
TNFRSF1BP20333 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF1BP20333 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF1BP20333 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
TNFRSF1BP20333 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF1BP20333 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF1BP20333 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF1BP20333 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF1BP20333 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF1BP20333 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF1BP20333 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF1BP20333 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.74■□□□□ 0.27
TNFRSF1BP20333 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF1BP20333 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TNFRSF1BP20333 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF1BP20333 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TNFRSF1BP20333 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TNFRSF1BP20333 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNFRSF1BP20333 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNFRSF1BP20333 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNFRSF1BP20333 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TNFRSF1BP20333 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
TNFRSF1BP20333 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNFRSF1BP20333 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TNFRSF1BP20333 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNFRSF1BP20333 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNFRSF1BP20333 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TNFRSF1BP20333 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.73■□□□□ 0.27
TNFRSF1BP20333 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNFRSF1BP20333 INGX-201ENST00000359239 846 ntBASIC16.73■□□□□ 0.27
TNFRSF1BP20333 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TNFRSF1BP20333 AC007663.1-201ENST00000438948 1240 ntBASIC16.73■□□□□ 0.27
TNFRSF1BP20333 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.73■□□□□ 0.27
TNFRSF1BP20333 AC010240.3-201ENST00000607688 395 ntBASIC16.73■□□□□ 0.27
TNFRSF1BP20333 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
TNFRSF1BP20333 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.73■□□□□ 0.27
TNFRSF1BP20333 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNFRSF1BP20333 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.73■□□□□ 0.27
TNFRSF1BP20333 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TNFRSF1BP20333 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TNFRSF1BP20333 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNFRSF1BP20333 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNFRSF1BP20333 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TNFRSF1BP20333 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.73■□□□□ 0.27
TNFRSF1BP20333 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNFRSF1BP20333 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNFRSF1BP20333 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
TNFRSF1BP20333 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNFRSF1BP20333 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNFRSF1BP20333 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.73■□□□□ 0.27
TNFRSF1BP20333 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNFRSF1BP20333 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNFRSF1BP20333 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.73■□□□□ 0.27
TNFRSF1BP20333 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 MIR1238-201ENST00000408483 83 ntBASIC16.72■□□□□ 0.27
TNFRSF1BP20333 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 BX088651.1-201ENST00000540551 451 ntBASIC16.72■□□□□ 0.27
TNFRSF1BP20333 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNFRSF1BP20333 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms