Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
NFKB1P19838 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.33■□□□□ 0.53
NFKB1P19838 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
NFKB1P19838 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
NFKB1P19838 LINC01311-201ENST00000565162 1445 ntBASIC18.33■□□□□ 0.53
NFKB1P19838 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
NFKB1P19838 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NFKB1P19838 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NFKB1P19838 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
NFKB1P19838 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
NFKB1P19838 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NFKB1P19838 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NFKB1P19838 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.33■□□□□ 0.52
NFKB1P19838 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.33■□□□□ 0.52
NFKB1P19838 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NFKB1P19838 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NFKB1P19838 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
NFKB1P19838 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NFKB1P19838 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NFKB1P19838 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NFKB1P19838 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.33■□□□□ 0.52
NFKB1P19838 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NFKB1P19838 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NFKB1P19838 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
NFKB1P19838 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
NFKB1P19838 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
NFKB1P19838 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.33■□□□□ 0.52
NFKB1P19838 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NFKB1P19838 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NFKB1P19838 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NFKB1P19838 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.32■□□□□ 0.52
NFKB1P19838 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
NFKB1P19838 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NFKB1P19838 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NFKB1P19838 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
NFKB1P19838 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
NFKB1P19838 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.32■□□□□ 0.52
NFKB1P19838 MIR662-201ENST00000384847 95 ntBASIC18.32■□□□□ 0.52
NFKB1P19838 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.32■□□□□ 0.52
NFKB1P19838 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.32■□□□□ 0.52
NFKB1P19838 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.32■□□□□ 0.52
NFKB1P19838 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.32■□□□□ 0.52
NFKB1P19838 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.32■□□□□ 0.52
NFKB1P19838 ZNF444P1-201ENST00000559497 298 ntBASIC18.32■□□□□ 0.52
NFKB1P19838 AC083849.1-201ENST00000615227 514 ntBASIC18.32■□□□□ 0.52
NFKB1P19838 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NFKB1P19838 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
NFKB1P19838 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NFKB1P19838 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NFKB1P19838 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
NFKB1P19838 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.32■□□□□ 0.52
NFKB1P19838 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NFKB1P19838 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
NFKB1P19838 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NFKB1P19838 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
NFKB1P19838 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
NFKB1P19838 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
NFKB1P19838 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.31■□□□□ 0.52
NFKB1P19838 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NFKB1P19838 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NFKB1P19838 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
NFKB1P19838 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
NFKB1P19838 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NFKB1P19838 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.31■□□□□ 0.52
NFKB1P19838 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
NFKB1P19838 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
NFKB1P19838 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NFKB1P19838 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.31■□□□□ 0.52
NFKB1P19838 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NFKB1P19838 AC006116.8-202ENST00000587620 1550 ntBASIC18.31■□□□□ 0.52
NFKB1P19838 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NFKB1P19838 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NFKB1P19838 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NFKB1P19838 SPDYE13P-201ENST00000445314 798 ntBASIC18.31■□□□□ 0.52
NFKB1P19838 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NFKB1P19838 AP003733.1-201ENST00000491725 852 ntBASIC18.31■□□□□ 0.52
NFKB1P19838 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NFKB1P19838 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NFKB1P19838 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.31■□□□□ 0.52
NFKB1P19838 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NFKB1P19838 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NFKB1P19838 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
NFKB1P19838 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NFKB1P19838 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.31■□□□□ 0.52
NFKB1P19838 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.31■□□□□ 0.52
NFKB1P19838 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NFKB1P19838 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NFKB1P19838 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.31■□□□□ 0.52
NFKB1P19838 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NFKB1P19838 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.3■□□□□ 0.52
NFKB1P19838 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NFKB1P19838 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NFKB1P19838 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.3■□□□□ 0.52
NFKB1P19838 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NFKB1P19838 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
NFKB1P19838 IGHGP-201ENST00000390555 1178 ntBASIC18.3■□□□□ 0.52
NFKB1P19838 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.3■□□□□ 0.52
NFKB1P19838 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.3■□□□□ 0.52
NFKB1P19838 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.3■□□□□ 0.52
NFKB1P19838 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms