Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.91■□□□□ 0.62
PDGFRAP16234 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDGFRAP16234 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.91■□□□□ 0.62
PDGFRAP16234 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDGFRAP16234 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.91■□□□□ 0.62
PDGFRAP16234 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.91■□□□□ 0.62
PDGFRAP16234 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.91■□□□□ 0.62
PDGFRAP16234 AC004263.2-201ENST00000617183 678 ntBASIC18.91■□□□□ 0.62
PDGFRAP16234 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDGFRAP16234 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.91■□□□□ 0.62
PDGFRAP16234 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDGFRAP16234 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDGFRAP16234 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.91■□□□□ 0.62
PDGFRAP16234 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDGFRAP16234 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDGFRAP16234 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDGFRAP16234 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDGFRAP16234 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDGFRAP16234 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDGFRAP16234 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDGFRAP16234 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFRAP16234 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.9■□□□□ 0.62
PDGFRAP16234 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.9■□□□□ 0.62
PDGFRAP16234 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFRAP16234 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFRAP16234 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFRAP16234 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFRAP16234 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFRAP16234 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.9■□□□□ 0.62
PDGFRAP16234 IGHGP-201ENST00000390555 1178 ntBASIC18.9■□□□□ 0.62
PDGFRAP16234 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.9■□□□□ 0.62
PDGFRAP16234 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.9■□□□□ 0.62
PDGFRAP16234 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.9■□□□□ 0.62
PDGFRAP16234 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.9■□□□□ 0.62
PDGFRAP16234 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFRAP16234 SLC25A6P5-201ENST00000435663 894 ntBASIC18.9■□□□□ 0.62
PDGFRAP16234 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFRAP16234 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.9■□□□□ 0.62
PDGFRAP16234 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.9■□□□□ 0.62
PDGFRAP16234 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.9■□□□□ 0.62
PDGFRAP16234 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.9■□□□□ 0.62
PDGFRAP16234 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFRAP16234 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFRAP16234 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFRAP16234 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFRAP16234 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFRAP16234 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
PDGFRAP16234 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFRAP16234 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.9■□□□□ 0.62
PDGFRAP16234 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFRAP16234 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.9■□□□□ 0.62
PDGFRAP16234 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFRAP16234 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFRAP16234 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFRAP16234 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFRAP16234 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFRAP16234 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
PDGFRAP16234 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
PDGFRAP16234 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PDGFRAP16234 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PDGFRAP16234 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PDGFRAP16234 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PDGFRAP16234 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.89■□□□□ 0.62
PDGFRAP16234 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
PDGFRAP16234 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.89■□□□□ 0.62
PDGFRAP16234 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDGFRAP16234 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.89■□□□□ 0.61
PDGFRAP16234 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
PDGFRAP16234 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDGFRAP16234 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDGFRAP16234 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDGFRAP16234 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDGFRAP16234 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDGFRAP16234 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PDGFRAP16234 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDGFRAP16234 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDGFRAP16234 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDGFRAP16234 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.89■□□□□ 0.61
PDGFRAP16234 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDGFRAP16234 UPK3BP1-201ENST00000428678 509 ntBASIC18.89■□□□□ 0.61
PDGFRAP16234 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.89■□□□□ 0.61
PDGFRAP16234 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.89■□□□□ 0.61
PDGFRAP16234 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
PDGFRAP16234 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.89■□□□□ 0.61
PDGFRAP16234 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.89■□□□□ 0.61
PDGFRAP16234 AC116407.4-201ENST00000623319 1061 ntBASIC18.89■□□□□ 0.61
PDGFRAP16234 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.89■□□□□ 0.61
PDGFRAP16234 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.89■□□□□ 0.61
PDGFRAP16234 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
PDGFRAP16234 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PDGFRAP16234 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.89■□□□□ 0.61
PDGFRAP16234 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
PDGFRAP16234 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.89■□□□□ 0.61
PDGFRAP16234 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDGFRAP16234 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDGFRAP16234 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.89■□□□□ 0.61
PDGFRAP16234 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.88■□□□□ 0.61
PDGFRAP16234 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDGFRAP16234 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.88■□□□□ 0.61
PDGFRAP16234 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms