Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC140113.3-201ENST00000605663 199 ntBASIC17.57■□□□□ 0.4
PCNAP12004 AL138966.2-201ENST00000621997 464 ntBASIC17.57■□□□□ 0.4
PCNAP12004 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.57■□□□□ 0.4
PCNAP12004 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCNAP12004 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.57■□□□□ 0.4
PCNAP12004 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCNAP12004 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCNAP12004 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCNAP12004 AC134043.2-201ENST00000624206 2238 ntBASIC17.56■□□□□ 0.4
PCNAP12004 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCNAP12004 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCNAP12004 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCNAP12004 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
PCNAP12004 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.56■□□□□ 0.4
PCNAP12004 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCNAP12004 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PCNAP12004 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.56■□□□□ 0.4
PCNAP12004 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCNAP12004 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
PCNAP12004 AL137013.1-201ENST00000432946 1228 ntBASIC17.56■□□□□ 0.4
PCNAP12004 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.56■□□□□ 0.4
PCNAP12004 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PCNAP12004 MIR3917-201ENST00000580971 93 ntBASIC17.56■□□□□ 0.4
PCNAP12004 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.56■□□□□ 0.4
PCNAP12004 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCNAP12004 LINC01126-201ENST00000623515 1646 ntBASIC17.56■□□□□ 0.4
PCNAP12004 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCNAP12004 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCNAP12004 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCNAP12004 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCNAP12004 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCNAP12004 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.56■□□□□ 0.4
PCNAP12004 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCNAP12004 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCNAP12004 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCNAP12004 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCNAP12004 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCNAP12004 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCNAP12004 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PCNAP12004 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCNAP12004 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.56■□□□□ 0.4
PCNAP12004 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PCNAP12004 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCNAP12004 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCNAP12004 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PCNAP12004 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCNAP12004 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.55■□□□□ 0.4
PCNAP12004 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCNAP12004 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCNAP12004 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCNAP12004 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCNAP12004 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCNAP12004 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCNAP12004 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCNAP12004 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCNAP12004 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCNAP12004 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
PCNAP12004 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.55■□□□□ 0.4
PCNAP12004 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PCNAP12004 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
PCNAP12004 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCNAP12004 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PCNAP12004 GCSHP2-201ENST00000560971 527 ntBASIC17.55■□□□□ 0.4
PCNAP12004 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.55■□□□□ 0.4
PCNAP12004 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
PCNAP12004 AL157888.1-201ENST00000631930 593 ntBASIC17.55■□□□□ 0.4
PCNAP12004 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCNAP12004 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
PCNAP12004 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.55■□□□□ 0.4
PCNAP12004 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
PCNAP12004 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.55■□□□□ 0.4
PCNAP12004 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.55■□□□□ 0.4
PCNAP12004 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCNAP12004 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.55■□□□□ 0.4
PCNAP12004 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCNAP12004 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PCNAP12004 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCNAP12004 AC138028.4-201ENST00000564984 1845 ntBASIC17.54■□□□□ 0.4
PCNAP12004 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PCNAP12004 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCNAP12004 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
PCNAP12004 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCNAP12004 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCNAP12004 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PCNAP12004 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCNAP12004 AC113347.1-201ENST00000413321 391 ntBASIC17.54■□□□□ 0.4
PCNAP12004 AC211429.1-201ENST00000415277 523 ntBASIC17.54■□□□□ 0.4
PCNAP12004 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.54■□□□□ 0.4
PCNAP12004 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.54■□□□□ 0.4
PCNAP12004 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
PCNAP12004 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PCNAP12004 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PCNAP12004 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCNAP12004 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.54■□□□□ 0.4
PCNAP12004 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCNAP12004 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCNAP12004 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCNAP12004 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.54■□□□□ 0.4
PCNAP12004 AL024508.2-201ENST00000607749 1894 ntBASIC17.54■□□□□ 0.4
PCNAP12004 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms