Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
THBS1P07996 LINC00602-201ENST00000629776 2065 ntBASIC16.58■□□□□ 0.25
THBS1P07996 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.58■□□□□ 0.25
THBS1P07996 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
THBS1P07996 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.25
THBS1P07996 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
THBS1P07996 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
THBS1P07996 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
THBS1P07996 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
THBS1P07996 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
THBS1P07996 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.58■□□□□ 0.24
THBS1P07996 KRT18P65-201ENST00000439811 1286 ntBASIC16.58■□□□□ 0.24
THBS1P07996 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.58■□□□□ 0.24
THBS1P07996 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.58■□□□□ 0.24
THBS1P07996 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
THBS1P07996 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.58■□□□□ 0.24
THBS1P07996 AL136038.4-201ENST00000603606 1261 ntBASIC16.58■□□□□ 0.24
THBS1P07996 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.58■□□□□ 0.24
THBS1P07996 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.58■□□□□ 0.24
THBS1P07996 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
THBS1P07996 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
THBS1P07996 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
THBS1P07996 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
THBS1P07996 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
THBS1P07996 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
THBS1P07996 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
THBS1P07996 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
THBS1P07996 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
THBS1P07996 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
THBS1P07996 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
THBS1P07996 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
THBS1P07996 AL391807.1-203ENST00000604392 2365 ntBASIC16.57■□□□□ 0.24
THBS1P07996 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
THBS1P07996 AC100803.2-201ENST00000562459 1963 ntBASIC16.57■□□□□ 0.24
THBS1P07996 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
THBS1P07996 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.57■□□□□ 0.24
THBS1P07996 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
THBS1P07996 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
THBS1P07996 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
THBS1P07996 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
THBS1P07996 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.57■□□□□ 0.24
THBS1P07996 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
THBS1P07996 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
THBS1P07996 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
THBS1P07996 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
THBS1P07996 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
THBS1P07996 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.57■□□□□ 0.24
THBS1P07996 DUX4L26-201ENST00000489078 1255 ntBASIC16.57■□□□□ 0.24
THBS1P07996 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.57■□□□□ 0.24
THBS1P07996 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
THBS1P07996 AC116407.2-201ENST00000613639 860 ntBASIC16.57■□□□□ 0.24
THBS1P07996 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
THBS1P07996 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
THBS1P07996 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.57■□□□□ 0.24
THBS1P07996 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
THBS1P07996 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.57■□□□□ 0.24
THBS1P07996 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
THBS1P07996 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
THBS1P07996 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.56■□□□□ 0.24
THBS1P07996 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
THBS1P07996 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.56■□□□□ 0.24
THBS1P07996 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
THBS1P07996 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
THBS1P07996 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
THBS1P07996 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
THBS1P07996 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
THBS1P07996 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
THBS1P07996 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
THBS1P07996 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
THBS1P07996 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
THBS1P07996 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
THBS1P07996 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
THBS1P07996 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.56■□□□□ 0.24
THBS1P07996 STARP1-201ENST00000397973 869 ntBASIC16.56■□□□□ 0.24
THBS1P07996 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
THBS1P07996 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.56■□□□□ 0.24
THBS1P07996 BX664615.1-201ENST00000443558 458 ntBASIC16.56■□□□□ 0.24
THBS1P07996 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
THBS1P07996 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
THBS1P07996 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.56■□□□□ 0.24
THBS1P07996 AL441883.1-201ENST00000566170 1045 ntBASIC16.56■□□□□ 0.24
THBS1P07996 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.56■□□□□ 0.24
THBS1P07996 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
THBS1P07996 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
THBS1P07996 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
THBS1P07996 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
THBS1P07996 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
THBS1P07996 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.56■□□□□ 0.24
THBS1P07996 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
THBS1P07996 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
THBS1P07996 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
THBS1P07996 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
THBS1P07996 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
THBS1P07996 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
THBS1P07996 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
THBS1P07996 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
THBS1P07996 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
THBS1P07996 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
THBS1P07996 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
THBS1P07996 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms