Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.97□□□□□ -0.01
CTSDP07339 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTSDP07339 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTSDP07339 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CTSDP07339 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CTSDP07339 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTSDP07339 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTSDP07339 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CTSDP07339 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTSDP07339 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC14.97□□□□□ -0.01
CTSDP07339 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTSDP07339 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTSDP07339 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.97□□□□□ -0.01
CTSDP07339 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC14.97□□□□□ -0.01
CTSDP07339 ASL-204ENST00000395331 1538 ntTSL 5 BASIC14.97□□□□□ -0.01
CTSDP07339 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CTSDP07339 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CTSDP07339 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CTSDP07339 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CTSDP07339 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CTSDP07339 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CTSDP07339 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.96□□□□□ -0.01
CTSDP07339 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.96□□□□□ -0.01
CTSDP07339 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CTSDP07339 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CTSDP07339 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CTSDP07339 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CTSDP07339 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CTSDP07339 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CTSDP07339 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CTSDP07339 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CTSDP07339 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC14.96□□□□□ -0.01
CTSDP07339 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC14.96□□□□□ -0.01
CTSDP07339 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CTSDP07339 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC14.96□□□□□ -0.01
CTSDP07339 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CTSDP07339 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
CTSDP07339 HOXB1-202ENST00000577092 1414 ntBASIC14.96□□□□□ -0.01
CTSDP07339 MIR6786-201ENST00000616843 113 ntBASIC14.96□□□□□ -0.01
CTSDP07339 CR392000.1-201ENST00000624770 1228 ntBASIC14.96□□□□□ -0.01
CTSDP07339 CABP2-204ENST00000636477 941 ntTSL 5 BASIC14.96□□□□□ -0.01
CTSDP07339 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
CTSDP07339 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CTSDP07339 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CTSDP07339 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.96□□□□□ -0.01
CTSDP07339 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CTSDP07339 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CTSDP07339 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CTSDP07339 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CTSDP07339 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CTSDP07339 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CTSDP07339 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CTSDP07339 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CTSDP07339 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CTSDP07339 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
CTSDP07339 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CTSDP07339 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CTSDP07339 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.95□□□□□ -0.02
CTSDP07339 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.95□□□□□ -0.02
CTSDP07339 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CTSDP07339 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CTSDP07339 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC14.95□□□□□ -0.02
CTSDP07339 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CTSDP07339 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CTSDP07339 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
CTSDP07339 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.95□□□□□ -0.02
CTSDP07339 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CTSDP07339 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CTSDP07339 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CTSDP07339 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC14.95□□□□□ -0.02
CTSDP07339 B3GAT3P1-201ENST00000471720 806 ntBASIC14.95□□□□□ -0.02
CTSDP07339 FDX2-207ENST00000494368 584 ntTSL 4 BASIC14.95□□□□□ -0.02
CTSDP07339 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC14.95□□□□□ -0.02
CTSDP07339 AC009065.1-201ENST00000564055 1225 ntBASIC14.95□□□□□ -0.02
CTSDP07339 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC14.95□□□□□ -0.02
CTSDP07339 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CTSDP07339 AP000692.2-201ENST00000608391 879 ntBASIC14.95□□□□□ -0.02
CTSDP07339 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CTSDP07339 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CTSDP07339 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CTSDP07339 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CTSDP07339 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CTSDP07339 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CTSDP07339 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CTSDP07339 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.95□□□□□ -0.02
CTSDP07339 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CTSDP07339 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.95□□□□□ -0.02
CTSDP07339 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CTSDP07339 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CTSDP07339 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC14.95□□□□□ -0.02
CTSDP07339 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CTSDP07339 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CTSDP07339 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CTSDP07339 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CTSDP07339 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.94□□□□□ -0.02
CTSDP07339 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CTSDP07339 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CTSDP07339 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CTSDP07339 KRT8P7-201ENST00000533003 1432 ntBASIC14.94□□□□□ -0.02
CTSDP07339 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms