Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
MT-ND1P03886 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MT-ND1P03886 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
MT-ND1P03886 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
MT-ND1P03886 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MT-ND1P03886 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.02■□□□□ 0.32
MT-ND1P03886 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MT-ND1P03886 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.02■□□□□ 0.32
MT-ND1P03886 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
MT-ND1P03886 MIR564-202ENST00000385049 94 ntBASIC17.02■□□□□ 0.32
MT-ND1P03886 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MT-ND1P03886 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.02■□□□□ 0.32
MT-ND1P03886 FAM207BP-201ENST00000447172 505 ntBASIC17.02■□□□□ 0.32
MT-ND1P03886 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.02■□□□□ 0.32
MT-ND1P03886 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.02■□□□□ 0.32
MT-ND1P03886 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MT-ND1P03886 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.02■□□□□ 0.32
MT-ND1P03886 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.02■□□□□ 0.32
MT-ND1P03886 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MT-ND1P03886 MIR6786-201ENST00000616843 113 ntBASIC17.02■□□□□ 0.32
MT-ND1P03886 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MT-ND1P03886 ITM2C-210ENST00000620962 501 ntBASIC17.02■□□□□ 0.32
MT-ND1P03886 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
MT-ND1P03886 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MT-ND1P03886 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MT-ND1P03886 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
MT-ND1P03886 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MT-ND1P03886 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MT-ND1P03886 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
MT-ND1P03886 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
MT-ND1P03886 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.02■□□□□ 0.31
MT-ND1P03886 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.02■□□□□ 0.31
MT-ND1P03886 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MT-ND1P03886 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
MT-ND1P03886 AC018695.7-201ENST00000624587 2492 ntBASIC17.02■□□□□ 0.31
MT-ND1P03886 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
MT-ND1P03886 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
MT-ND1P03886 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MT-ND1P03886 SDHAP2-201ENST00000455183 2001 ntBASIC17.01■□□□□ 0.31
MT-ND1P03886 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.01■□□□□ 0.31
MT-ND1P03886 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MT-ND1P03886 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
MT-ND1P03886 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
MT-ND1P03886 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.01■□□□□ 0.31
MT-ND1P03886 B3GAT3P1-201ENST00000471720 806 ntBASIC17.01■□□□□ 0.31
MT-ND1P03886 AC011506.1-201ENST00000474329 610 ntBASIC17.01■□□□□ 0.31
MT-ND1P03886 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.01■□□□□ 0.31
MT-ND1P03886 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MT-ND1P03886 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.01■□□□□ 0.31
MT-ND1P03886 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.01■□□□□ 0.31
MT-ND1P03886 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MT-ND1P03886 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.01■□□□□ 0.31
MT-ND1P03886 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MT-ND1P03886 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
MT-ND1P03886 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MT-ND1P03886 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MT-ND1P03886 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MT-ND1P03886 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MT-ND1P03886 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.01■□□□□ 0.31
MT-ND1P03886 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MT-ND1P03886 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
MT-ND1P03886 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
MT-ND1P03886 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
MT-ND1P03886 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17■□□□□ 0.31
MT-ND1P03886 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MT-ND1P03886 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17■□□□□ 0.31
MT-ND1P03886 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17■□□□□ 0.31
MT-ND1P03886 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MT-ND1P03886 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MT-ND1P03886 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17■□□□□ 0.31
MT-ND1P03886 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17■□□□□ 0.31
MT-ND1P03886 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MT-ND1P03886 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17■□□□□ 0.31
MT-ND1P03886 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MT-ND1P03886 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
MT-ND1P03886 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17■□□□□ 0.31
MT-ND1P03886 AP000593.1-201ENST00000393668 712 ntBASIC17■□□□□ 0.31
MT-ND1P03886 KRT18P29-201ENST00000397031 1267 ntBASIC17■□□□□ 0.31
MT-ND1P03886 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17■□□□□ 0.31
MT-ND1P03886 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
MT-ND1P03886 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17■□□□□ 0.31
MT-ND1P03886 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17■□□□□ 0.31
MT-ND1P03886 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17■□□□□ 0.31
MT-ND1P03886 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
MT-ND1P03886 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
MT-ND1P03886 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17■□□□□ 0.31
MT-ND1P03886 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17■□□□□ 0.31
MT-ND1P03886 AL135905.2-201ENST00000584934 1404 ntBASIC17■□□□□ 0.31
MT-ND1P03886 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17■□□□□ 0.31
MT-ND1P03886 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
MT-ND1P03886 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MT-ND1P03886 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
MT-ND1P03886 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
MT-ND1P03886 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17■□□□□ 0.31
MT-ND1P03886 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MT-ND1P03886 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MT-ND1P03886 KRT18P55-202ENST00000578578 1546 ntBASIC17■□□□□ 0.31
MT-ND1P03886 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
MT-ND1P03886 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17■□□□□ 0.31
MT-ND1P03886 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms