Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.97■□□□□ 0.95
PRPF40AO75400 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PRPF40AO75400 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC20.97■□□□□ 0.95
PRPF40AO75400 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.97■□□□□ 0.95
PRPF40AO75400 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRPF40AO75400 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRPF40AO75400 AC009102.3-201ENST00000623118 1491 ntBASIC20.97■□□□□ 0.95
PRPF40AO75400 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
PRPF40AO75400 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRPF40AO75400 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRPF40AO75400 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRPF40AO75400 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRPF40AO75400 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.97■□□□□ 0.95
PRPF40AO75400 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRPF40AO75400 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRPF40AO75400 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRPF40AO75400 CR392000.1-201ENST00000624770 1228 ntBASIC20.97■□□□□ 0.95
PRPF40AO75400 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
PRPF40AO75400 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.97■□□□□ 0.95
PRPF40AO75400 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRPF40AO75400 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.97■□□□□ 0.95
PRPF40AO75400 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRPF40AO75400 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRPF40AO75400 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRPF40AO75400 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRPF40AO75400 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRPF40AO75400 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.96■□□□□ 0.95
PRPF40AO75400 LINC01126-201ENST00000623515 1646 ntBASIC20.96■□□□□ 0.95
PRPF40AO75400 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRPF40AO75400 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRPF40AO75400 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRPF40AO75400 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PRPF40AO75400 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRPF40AO75400 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.96■□□□□ 0.95
PRPF40AO75400 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PRPF40AO75400 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRPF40AO75400 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRPF40AO75400 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PRPF40AO75400 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PRPF40AO75400 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.96■□□□□ 0.95
PRPF40AO75400 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.96■□□□□ 0.95
PRPF40AO75400 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PRPF40AO75400 AL049637.2-201ENST00000641778 930 ntBASIC20.96■□□□□ 0.95
PRPF40AO75400 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PRPF40AO75400 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC20.96■□□□□ 0.95
PRPF40AO75400 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
PRPF40AO75400 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.96■□□□□ 0.95
PRPF40AO75400 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRPF40AO75400 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
PRPF40AO75400 KRT16P1-201ENST00000399124 1418 ntBASIC20.95■□□□□ 0.95
PRPF40AO75400 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC20.95■□□□□ 0.95
PRPF40AO75400 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC20.95■□□□□ 0.95
PRPF40AO75400 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.95■□□□□ 0.94
PRPF40AO75400 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRPF40AO75400 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC20.95■□□□□ 0.94
PRPF40AO75400 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRPF40AO75400 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PRPF40AO75400 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
PRPF40AO75400 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.95■□□□□ 0.94
PRPF40AO75400 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.95■□□□□ 0.94
PRPF40AO75400 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PRPF40AO75400 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRPF40AO75400 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PRPF40AO75400 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
PRPF40AO75400 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.95■□□□□ 0.94
PRPF40AO75400 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.95■□□□□ 0.94
PRPF40AO75400 AL031985.4-201ENST00000642138 673 ntBASIC20.95■□□□□ 0.94
PRPF40AO75400 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRPF40AO75400 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRPF40AO75400 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRPF40AO75400 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRPF40AO75400 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRPF40AO75400 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PRPF40AO75400 CROCCP2-202ENST00000412962 2773 ntBASIC20.95■□□□□ 0.94
PRPF40AO75400 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRPF40AO75400 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRPF40AO75400 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PRPF40AO75400 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRPF40AO75400 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRPF40AO75400 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.94■□□□□ 0.94
PRPF40AO75400 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRPF40AO75400 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRPF40AO75400 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.94■□□□□ 0.94
PRPF40AO75400 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.94■□□□□ 0.94
PRPF40AO75400 TSPY7P-201ENST00000431358 1114 ntBASIC20.94■□□□□ 0.94
PRPF40AO75400 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRPF40AO75400 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.94■□□□□ 0.94
PRPF40AO75400 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRPF40AO75400 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PRPF40AO75400 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.94■□□□□ 0.94
PRPF40AO75400 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRPF40AO75400 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRPF40AO75400 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.94■□□□□ 0.94
PRPF40AO75400 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.94■□□□□ 0.94
PRPF40AO75400 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.94■□□□□ 0.94
PRPF40AO75400 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.94■□□□□ 0.94
PRPF40AO75400 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRPF40AO75400 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.94■□□□□ 0.94
PRPF40AO75400 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRPF40AO75400 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms