Protein–RNA interactions for Protein: O75396

SEC22B, Vesicle-trafficking protein SEC22b, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22BO75396 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SEC22BO75396 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.39■□□□□ 0.37
SEC22BO75396 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SEC22BO75396 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEC22BO75396 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SEC22BO75396 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.39■□□□□ 0.37
SEC22BO75396 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.39■□□□□ 0.37
SEC22BO75396 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEC22BO75396 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEC22BO75396 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.39■□□□□ 0.37
SEC22BO75396 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SEC22BO75396 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
SEC22BO75396 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEC22BO75396 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEC22BO75396 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEC22BO75396 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SEC22BO75396 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEC22BO75396 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SEC22BO75396 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.38■□□□□ 0.37
SEC22BO75396 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEC22BO75396 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEC22BO75396 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEC22BO75396 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEC22BO75396 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SEC22BO75396 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SEC22BO75396 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEC22BO75396 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SEC22BO75396 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SEC22BO75396 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEC22BO75396 ECEL1P2-202ENST00000465689 757 ntBASIC17.38■□□□□ 0.37
SEC22BO75396 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.38■□□□□ 0.37
SEC22BO75396 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.38■□□□□ 0.37
SEC22BO75396 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
SEC22BO75396 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.38■□□□□ 0.37
SEC22BO75396 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SEC22BO75396 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.38■□□□□ 0.37
SEC22BO75396 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SEC22BO75396 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEC22BO75396 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SEC22BO75396 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEC22BO75396 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SEC22BO75396 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SEC22BO75396 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SEC22BO75396 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SEC22BO75396 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SEC22BO75396 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEC22BO75396 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.38■□□□□ 0.37
SEC22BO75396 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.38■□□□□ 0.37
SEC22BO75396 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEC22BO75396 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SEC22BO75396 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.38■□□□□ 0.37
SEC22BO75396 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEC22BO75396 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SEC22BO75396 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SEC22BO75396 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.38■□□□□ 0.37
SEC22BO75396 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.38■□□□□ 0.37
SEC22BO75396 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEC22BO75396 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEC22BO75396 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEC22BO75396 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.37■□□□□ 0.37
SEC22BO75396 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEC22BO75396 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.37■□□□□ 0.37
SEC22BO75396 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEC22BO75396 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.37■□□□□ 0.37
SEC22BO75396 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SEC22BO75396 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEC22BO75396 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEC22BO75396 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.37■□□□□ 0.37
SEC22BO75396 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SEC22BO75396 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.37■□□□□ 0.37
SEC22BO75396 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.37■□□□□ 0.37
SEC22BO75396 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.37■□□□□ 0.37
SEC22BO75396 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.37■□□□□ 0.37
SEC22BO75396 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEC22BO75396 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEC22BO75396 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SEC22BO75396 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SEC22BO75396 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEC22BO75396 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEC22BO75396 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SEC22BO75396 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEC22BO75396 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEC22BO75396 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEC22BO75396 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEC22BO75396 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SEC22BO75396 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEC22BO75396 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SEC22BO75396 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.36■□□□□ 0.37
SEC22BO75396 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SEC22BO75396 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.36■□□□□ 0.37
SEC22BO75396 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SEC22BO75396 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SEC22BO75396 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SEC22BO75396 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SEC22BO75396 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SEC22BO75396 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.36■□□□□ 0.37
SEC22BO75396 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SEC22BO75396 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.36■□□□□ 0.37
SEC22BO75396 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.36■□□□□ 0.37
SEC22BO75396 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms