Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GDF9O60383 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.46■□□□□ 0.39
GDF9O60383 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GDF9O60383 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.46■□□□□ 0.39
GDF9O60383 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
GDF9O60383 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
GDF9O60383 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GDF9O60383 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GDF9O60383 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
GDF9O60383 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.46■□□□□ 0.39
GDF9O60383 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GDF9O60383 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
GDF9O60383 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GDF9O60383 PMPCAP1-201ENST00000508114 1576 ntBASIC17.45■□□□□ 0.38
GDF9O60383 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GDF9O60383 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GDF9O60383 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
GDF9O60383 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GDF9O60383 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GDF9O60383 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
GDF9O60383 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.45■□□□□ 0.38
GDF9O60383 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.45■□□□□ 0.38
GDF9O60383 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.45■□□□□ 0.38
GDF9O60383 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.45■□□□□ 0.38
GDF9O60383 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GDF9O60383 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.45■□□□□ 0.38
GDF9O60383 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.45■□□□□ 0.38
GDF9O60383 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.45■□□□□ 0.38
GDF9O60383 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
GDF9O60383 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.45■□□□□ 0.38
GDF9O60383 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
GDF9O60383 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GDF9O60383 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.45■□□□□ 0.38
GDF9O60383 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GDF9O60383 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GDF9O60383 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GDF9O60383 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GDF9O60383 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
GDF9O60383 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GDF9O60383 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GDF9O60383 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GDF9O60383 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.44■□□□□ 0.38
GDF9O60383 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GDF9O60383 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
GDF9O60383 SLC25A24-204ENST00000569674 2357 ntBASIC17.44■□□□□ 0.38
GDF9O60383 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GDF9O60383 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.44■□□□□ 0.38
GDF9O60383 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GDF9O60383 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.44■□□□□ 0.38
GDF9O60383 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.44■□□□□ 0.38
GDF9O60383 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.44■□□□□ 0.38
GDF9O60383 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.44■□□□□ 0.38
GDF9O60383 AF228730.6-201ENST00000641497 218 ntBASIC17.44■□□□□ 0.38
GDF9O60383 AC084121.3-201ENST00000641716 218 ntBASIC17.44■□□□□ 0.38
GDF9O60383 AC105233.6-201ENST00000642093 218 ntBASIC17.44■□□□□ 0.38
GDF9O60383 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GDF9O60383 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GDF9O60383 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GDF9O60383 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GDF9O60383 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
GDF9O60383 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GDF9O60383 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
GDF9O60383 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
GDF9O60383 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.44■□□□□ 0.38
GDF9O60383 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GDF9O60383 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.43■□□□□ 0.38
GDF9O60383 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.43■□□□□ 0.38
GDF9O60383 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GDF9O60383 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.43■□□□□ 0.38
GDF9O60383 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GDF9O60383 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GDF9O60383 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GDF9O60383 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GDF9O60383 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GDF9O60383 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.43■□□□□ 0.38
GDF9O60383 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.43■□□□□ 0.38
GDF9O60383 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GDF9O60383 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
GDF9O60383 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GDF9O60383 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GDF9O60383 AC112698.1-201ENST00000510299 916 ntBASIC17.43■□□□□ 0.38
GDF9O60383 AC190387.1-201ENST00000551683 408 ntBASIC17.43■□□□□ 0.38
GDF9O60383 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.43■□□□□ 0.38
GDF9O60383 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.43■□□□□ 0.38
GDF9O60383 AC073592.4-201ENST00000623827 446 ntBASIC17.43■□□□□ 0.38
GDF9O60383 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.43■□□□□ 0.38
GDF9O60383 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.43■□□□□ 0.38
GDF9O60383 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GDF9O60383 AC006504.4-201ENST00000592118 1568 ntBASIC17.43■□□□□ 0.38
GDF9O60383 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.43■□□□□ 0.38
GDF9O60383 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GDF9O60383 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
GDF9O60383 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GDF9O60383 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
GDF9O60383 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GDF9O60383 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
GDF9O60383 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
GDF9O60383 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GDF9O60383 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GDF9O60383 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms