Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CACNA1AO00555 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.79■□□□□ 0.28
CACNA1AO00555 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CACNA1AO00555 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.79■□□□□ 0.28
CACNA1AO00555 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.79■□□□□ 0.28
CACNA1AO00555 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CACNA1AO00555 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.79■□□□□ 0.28
CACNA1AO00555 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CACNA1AO00555 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CACNA1AO00555 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CACNA1AO00555 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.79■□□□□ 0.28
CACNA1AO00555 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.79■□□□□ 0.28
CACNA1AO00555 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.79■□□□□ 0.28
CACNA1AO00555 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CACNA1AO00555 TEX21P-204ENST00000641479 1693 ntBASIC16.79■□□□□ 0.28
CACNA1AO00555 AC022144.1-201ENST00000602255 1580 ntBASIC16.79■□□□□ 0.28
CACNA1AO00555 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CACNA1AO00555 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CACNA1AO00555 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.78■□□□□ 0.28
CACNA1AO00555 KRT17P8-201ENST00000540749 863 ntBASIC16.78■□□□□ 0.28
CACNA1AO00555 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CACNA1AO00555 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.78■□□□□ 0.28
CACNA1AO00555 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.78■□□□□ 0.28
CACNA1AO00555 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CACNA1AO00555 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CACNA1AO00555 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.78■□□□□ 0.28
CACNA1AO00555 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CACNA1AO00555 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.78■□□□□ 0.28
CACNA1AO00555 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.78■□□□□ 0.28
CACNA1AO00555 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CACNA1AO00555 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC16.78■□□□□ 0.28
CACNA1AO00555 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.78■□□□□ 0.28
CACNA1AO00555 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CACNA1AO00555 AC002056.1-201ENST00000395613 760 ntBASIC16.78■□□□□ 0.28
CACNA1AO00555 RHOQP1-201ENST00000555758 579 ntBASIC16.78■□□□□ 0.28
CACNA1AO00555 KRT8P23-201ENST00000560090 1207 ntBASIC16.78■□□□□ 0.28
CACNA1AO00555 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CACNA1AO00555 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.78■□□□□ 0.28
CACNA1AO00555 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.78■□□□□ 0.28
CACNA1AO00555 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CACNA1AO00555 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CACNA1AO00555 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CACNA1AO00555 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CACNA1AO00555 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CACNA1AO00555 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.77■□□□□ 0.28
CACNA1AO00555 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CACNA1AO00555 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CACNA1AO00555 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.77■□□□□ 0.28
CACNA1AO00555 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.77■□□□□ 0.28
CACNA1AO00555 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CACNA1AO00555 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.77■□□□□ 0.28
CACNA1AO00555 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CACNA1AO00555 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CACNA1AO00555 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
CACNA1AO00555 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.77■□□□□ 0.28
CACNA1AO00555 SPDYE14P-201ENST00000442619 822 ntBASIC16.77■□□□□ 0.28
CACNA1AO00555 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.77■□□□□ 0.28
CACNA1AO00555 AC132938.2-201ENST00000579188 680 ntBASIC16.77■□□□□ 0.28
CACNA1AO00555 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.77■□□□□ 0.28
CACNA1AO00555 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CACNA1AO00555 AL591163.1-201ENST00000641757 987 ntBASIC16.77■□□□□ 0.28
CACNA1AO00555 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
CACNA1AO00555 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CACNA1AO00555 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CACNA1AO00555 KRT8P44-201ENST00000441609 1350 ntBASIC16.77■□□□□ 0.27
CACNA1AO00555 Z82202.1-201ENST00000623446 1880 ntBASIC16.77■□□□□ 0.27
CACNA1AO00555 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CACNA1AO00555 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
CACNA1AO00555 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CACNA1AO00555 REXO1L6P-201ENST00000603433 1515 ntBASIC16.76■□□□□ 0.27
CACNA1AO00555 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CACNA1AO00555 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CACNA1AO00555 AC096633.1-201ENST00000422446 749 ntBASIC16.76■□□□□ 0.27
CACNA1AO00555 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.76■□□□□ 0.27
CACNA1AO00555 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CACNA1AO00555 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.76■□□□□ 0.27
CACNA1AO00555 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.76■□□□□ 0.27
CACNA1AO00555 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.76■□□□□ 0.27
CACNA1AO00555 AC233723.2-201ENST00000623798 2106 ntBASIC16.76■□□□□ 0.27
CACNA1AO00555 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CACNA1AO00555 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CACNA1AO00555 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CACNA1AO00555 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.76■□□□□ 0.27
CACNA1AO00555 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC16.76■□□□□ 0.27
CACNA1AO00555 MIR149-201ENST00000384879 89 ntBASIC16.76■□□□□ 0.27
CACNA1AO00555 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CACNA1AO00555 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.76■□□□□ 0.27
CACNA1AO00555 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.76■□□□□ 0.27
CACNA1AO00555 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.76■□□□□ 0.27
CACNA1AO00555 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CACNA1AO00555 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CACNA1AO00555 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CACNA1AO00555 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
CACNA1AO00555 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CACNA1AO00555 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.75■□□□□ 0.27
CACNA1AO00555 FAM185BP-201ENST00000443595 716 ntBASIC16.75■□□□□ 0.27
CACNA1AO00555 INE1-201ENST00000456273 945 ntBASIC16.75■□□□□ 0.27
CACNA1AO00555 AC069120.2-201ENST00000524091 540 ntBASIC16.75■□□□□ 0.27
CACNA1AO00555 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.75■□□□□ 0.27
CACNA1AO00555 LINC01225-203ENST00000563550 1244 ntBASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms