Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.69■□□□□ 0.58
SRRM3A6NNA2 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SRRM3A6NNA2 LINC00602-201ENST00000629776 2065 ntBASIC18.69■□□□□ 0.58
SRRM3A6NNA2 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRRM3A6NNA2 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SRRM3A6NNA2 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRRM3A6NNA2 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.68■□□□□ 0.58
SRRM3A6NNA2 REXO1L9P-201ENST00000604264 2108 ntBASIC18.68■□□□□ 0.58
SRRM3A6NNA2 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SRRM3A6NNA2 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SRRM3A6NNA2 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRRM3A6NNA2 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.68■□□□□ 0.58
SRRM3A6NNA2 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRRM3A6NNA2 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRRM3A6NNA2 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.68■□□□□ 0.58
SRRM3A6NNA2 AL022342.1-201ENST00000400363 863 ntBASIC18.68■□□□□ 0.58
SRRM3A6NNA2 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SRRM3A6NNA2 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.68■□□□□ 0.58
SRRM3A6NNA2 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.68■□□□□ 0.58
SRRM3A6NNA2 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.68■□□□□ 0.58
SRRM3A6NNA2 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.68■□□□□ 0.58
SRRM3A6NNA2 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.68■□□□□ 0.58
SRRM3A6NNA2 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.68■□□□□ 0.58
SRRM3A6NNA2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.68■□□□□ 0.58
SRRM3A6NNA2 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SRRM3A6NNA2 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.68■□□□□ 0.58
SRRM3A6NNA2 AC141257.4-201ENST00000634557 245 ntBASIC18.68■□□□□ 0.58
SRRM3A6NNA2 AC136944.6-201ENST00000634818 245 ntBASIC18.68■□□□□ 0.58
SRRM3A6NNA2 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRRM3A6NNA2 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SRRM3A6NNA2 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.68■□□□□ 0.58
SRRM3A6NNA2 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SRRM3A6NNA2 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.68■□□□□ 0.58
SRRM3A6NNA2 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SRRM3A6NNA2 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRRM3A6NNA2 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.68■□□□□ 0.58
SRRM3A6NNA2 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
SRRM3A6NNA2 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SRRM3A6NNA2 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRRM3A6NNA2 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRRM3A6NNA2 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRRM3A6NNA2 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
SRRM3A6NNA2 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.68■□□□□ 0.58
SRRM3A6NNA2 AC006116.8-202ENST00000587620 1550 ntBASIC18.68■□□□□ 0.58
SRRM3A6NNA2 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.68■□□□□ 0.58
SRRM3A6NNA2 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRRM3A6NNA2 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.67■□□□□ 0.58
SRRM3A6NNA2 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SRRM3A6NNA2 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRRM3A6NNA2 AC112777.1-201ENST00000540175 1423 ntBASIC18.67■□□□□ 0.58
SRRM3A6NNA2 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRRM3A6NNA2 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRRM3A6NNA2 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRRM3A6NNA2 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.67■□□□□ 0.58
SRRM3A6NNA2 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.67■□□□□ 0.58
SRRM3A6NNA2 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRRM3A6NNA2 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRRM3A6NNA2 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SRRM3A6NNA2 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.67■□□□□ 0.58
SRRM3A6NNA2 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SRRM3A6NNA2 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.67■□□□□ 0.58
SRRM3A6NNA2 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SRRM3A6NNA2 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.67■□□□□ 0.58
SRRM3A6NNA2 AC116562.4-202ENST00000641738 218 ntBASIC18.67■□□□□ 0.58
SRRM3A6NNA2 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRRM3A6NNA2 MTMR9LP-203ENST00000426597 1545 ntBASIC18.67■□□□□ 0.58
SRRM3A6NNA2 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SRRM3A6NNA2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.67■□□□□ 0.58
SRRM3A6NNA2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRRM3A6NNA2 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRRM3A6NNA2 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRRM3A6NNA2 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRRM3A6NNA2 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.66■□□□□ 0.58
SRRM3A6NNA2 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.66■□□□□ 0.58
SRRM3A6NNA2 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SRRM3A6NNA2 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRRM3A6NNA2 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SRRM3A6NNA2 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.66■□□□□ 0.58
SRRM3A6NNA2 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRRM3A6NNA2 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SRRM3A6NNA2 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRRM3A6NNA2 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SRRM3A6NNA2 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SRRM3A6NNA2 ATP5G2P1-201ENST00000433580 426 ntBASIC18.66■□□□□ 0.58
SRRM3A6NNA2 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SRRM3A6NNA2 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.66■□□□□ 0.58
SRRM3A6NNA2 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.66■□□□□ 0.58
SRRM3A6NNA2 VENTXP5-201ENST00000523979 775 ntBASIC18.66■□□□□ 0.58
SRRM3A6NNA2 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRRM3A6NNA2 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.66■□□□□ 0.58
SRRM3A6NNA2 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.66■□□□□ 0.58
SRRM3A6NNA2 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.66■□□□□ 0.58
SRRM3A6NNA2 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.66■□□□□ 0.58
SRRM3A6NNA2 AL031432.5-201ENST00000641059 760 ntBASIC18.66■□□□□ 0.58
SRRM3A6NNA2 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRRM3A6NNA2 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRRM3A6NNA2 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRRM3A6NNA2 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
SRRM3A6NNA2 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SRRM3A6NNA2 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms