Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPSF4LA6NMK7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.65■□□□□ 0.26
CPSF4LA6NMK7 AC009947.2-201ENST00000444014 672 ntBASIC16.65■□□□□ 0.26
CPSF4LA6NMK7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.65■□□□□ 0.26
CPSF4LA6NMK7 AC128688.1-201ENST00000487626 519 ntBASIC16.65■□□□□ 0.26
CPSF4LA6NMK7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.65■□□□□ 0.26
CPSF4LA6NMK7 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.65■□□□□ 0.26
CPSF4LA6NMK7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.65■□□□□ 0.26
CPSF4LA6NMK7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.65■□□□□ 0.26
CPSF4LA6NMK7 MIR4497-201ENST00000583208 89 ntBASIC16.65■□□□□ 0.26
CPSF4LA6NMK7 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPSF4LA6NMK7 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPSF4LA6NMK7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPSF4LA6NMK7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPSF4LA6NMK7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPSF4LA6NMK7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPSF4LA6NMK7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPSF4LA6NMK7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CPSF4LA6NMK7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPSF4LA6NMK7 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPSF4LA6NMK7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CPSF4LA6NMK7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPSF4LA6NMK7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CPSF4LA6NMK7 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CPSF4LA6NMK7 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 AC006116.8-202ENST00000587620 1550 ntBASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 NAPSB-206ENST00000562112 1266 ntBASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 KRT18P55-202ENST00000578578 1546 ntBASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.64■□□□□ 0.25
CPSF4LA6NMK7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPSF4LA6NMK7 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPSF4LA6NMK7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.63■□□□□ 0.25
CPSF4LA6NMK7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CPSF4LA6NMK7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPSF4LA6NMK7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CPSF4LA6NMK7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CPSF4LA6NMK7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.63■□□□□ 0.25
CPSF4LA6NMK7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.63■□□□□ 0.25
CPSF4LA6NMK7 SEC1P-202ENST00000473944 940 ntBASIC16.63■□□□□ 0.25
CPSF4LA6NMK7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.63■□□□□ 0.25
CPSF4LA6NMK7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPSF4LA6NMK7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.63■□□□□ 0.25
CPSF4LA6NMK7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CPSF4LA6NMK7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.63■□□□□ 0.25
CPSF4LA6NMK7 AC010947.1-201ENST00000623454 693 ntBASIC16.63■□□□□ 0.25
CPSF4LA6NMK7 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPSF4LA6NMK7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CPSF4LA6NMK7 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CPSF4LA6NMK7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CPSF4LA6NMK7 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPSF4LA6NMK7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CPSF4LA6NMK7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CPSF4LA6NMK7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.63■□□□□ 0.25
CPSF4LA6NMK7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPSF4LA6NMK7 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPSF4LA6NMK7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.62■□□□□ 0.25
CPSF4LA6NMK7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPSF4LA6NMK7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPSF4LA6NMK7 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.62■□□□□ 0.25
CPSF4LA6NMK7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CPSF4LA6NMK7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms