Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDHR4A6H8M9 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDHR4A6H8M9 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDHR4A6H8M9 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.58■□□□□ 0.24
CDHR4A6H8M9 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.58■□□□□ 0.24
CDHR4A6H8M9 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
CDHR4A6H8M9 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDHR4A6H8M9 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDHR4A6H8M9 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDHR4A6H8M9 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDHR4A6H8M9 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.58■□□□□ 0.24
CDHR4A6H8M9 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDHR4A6H8M9 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDHR4A6H8M9 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDHR4A6H8M9 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDHR4A6H8M9 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDHR4A6H8M9 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.58■□□□□ 0.24
CDHR4A6H8M9 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.57■□□□□ 0.24
CDHR4A6H8M9 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDHR4A6H8M9 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDHR4A6H8M9 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.57■□□□□ 0.24
CDHR4A6H8M9 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDHR4A6H8M9 LINC00602-201ENST00000629776 2065 ntBASIC16.57■□□□□ 0.24
CDHR4A6H8M9 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDHR4A6H8M9 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDHR4A6H8M9 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CDHR4A6H8M9 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDHR4A6H8M9 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDHR4A6H8M9 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.57■□□□□ 0.24
CDHR4A6H8M9 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDHR4A6H8M9 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDHR4A6H8M9 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDHR4A6H8M9 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CDHR4A6H8M9 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.57■□□□□ 0.24
CDHR4A6H8M9 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDHR4A6H8M9 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.57■□□□□ 0.24
CDHR4A6H8M9 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.57■□□□□ 0.24
CDHR4A6H8M9 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.57■□□□□ 0.24
CDHR4A6H8M9 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CDHR4A6H8M9 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CDHR4A6H8M9 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDHR4A6H8M9 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.57■□□□□ 0.24
CDHR4A6H8M9 AC079602.3-201ENST00000623931 403 ntBASIC16.57■□□□□ 0.24
CDHR4A6H8M9 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CDHR4A6H8M9 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
CDHR4A6H8M9 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CDHR4A6H8M9 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDHR4A6H8M9 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDHR4A6H8M9 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDHR4A6H8M9 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
CDHR4A6H8M9 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDHR4A6H8M9 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDHR4A6H8M9 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CDHR4A6H8M9 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDHR4A6H8M9 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDHR4A6H8M9 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.56■□□□□ 0.24
CDHR4A6H8M9 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDHR4A6H8M9 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CDHR4A6H8M9 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDHR4A6H8M9 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDHR4A6H8M9 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDHR4A6H8M9 AL391807.1-203ENST00000604392 2365 ntBASIC16.56■□□□□ 0.24
CDHR4A6H8M9 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CDHR4A6H8M9 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CDHR4A6H8M9 STARP1-201ENST00000397973 869 ntBASIC16.56■□□□□ 0.24
CDHR4A6H8M9 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.56■□□□□ 0.24
CDHR4A6H8M9 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CDHR4A6H8M9 YBX1P2-201ENST00000489612 999 ntBASIC16.56■□□□□ 0.24
CDHR4A6H8M9 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.56■□□□□ 0.24
CDHR4A6H8M9 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
CDHR4A6H8M9 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CDHR4A6H8M9 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.56■□□□□ 0.24
CDHR4A6H8M9 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.56■□□□□ 0.24
CDHR4A6H8M9 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDHR4A6H8M9 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDHR4A6H8M9 AC024563.2-201ENST00000603282 481 ntBASIC16.56■□□□□ 0.24
CDHR4A6H8M9 AL136038.4-201ENST00000603606 1261 ntBASIC16.56■□□□□ 0.24
CDHR4A6H8M9 AC139887.4-201ENST00000607877 719 ntBASIC16.56■□□□□ 0.24
CDHR4A6H8M9 AC011558.1-201ENST00000623459 338 ntBASIC16.56■□□□□ 0.24
CDHR4A6H8M9 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CDHR4A6H8M9 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDHR4A6H8M9 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.56■□□□□ 0.24
CDHR4A6H8M9 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDHR4A6H8M9 AC100803.2-201ENST00000562459 1963 ntBASIC16.56■□□□□ 0.24
CDHR4A6H8M9 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDHR4A6H8M9 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDHR4A6H8M9 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDHR4A6H8M9 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CDHR4A6H8M9 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
CDHR4A6H8M9 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDHR4A6H8M9 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CDHR4A6H8M9 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.56■□□□□ 0.24
CDHR4A6H8M9 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDHR4A6H8M9 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDHR4A6H8M9 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDHR4A6H8M9 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDHR4A6H8M9 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.55■□□□□ 0.24
CDHR4A6H8M9 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.55■□□□□ 0.24
CDHR4A6H8M9 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDHR4A6H8M9 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms