Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
TRBV5-4A0A0C4DH59 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRBV5-4A0A0C4DH59 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.71■□□□□ 0.42
TRBV5-4A0A0C4DH59 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV5-4A0A0C4DH59 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV5-4A0A0C4DH59 AC009949.1-201ENST00000623048 1830 ntBASIC17.7■□□□□ 0.42
TRBV5-4A0A0C4DH59 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
TRBV5-4A0A0C4DH59 GNAS-203ENST00000306120 1878 ntBASIC17.7■□□□□ 0.42
TRBV5-4A0A0C4DH59 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV5-4A0A0C4DH59 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TRBV5-4A0A0C4DH59 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV5-4A0A0C4DH59 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV5-4A0A0C4DH59 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV5-4A0A0C4DH59 DRAXINP1-201ENST00000437611 948 ntBASIC17.7■□□□□ 0.42
TRBV5-4A0A0C4DH59 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.7■□□□□ 0.42
TRBV5-4A0A0C4DH59 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV5-4A0A0C4DH59 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.7■□□□□ 0.42
TRBV5-4A0A0C4DH59 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV5-4A0A0C4DH59 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.7■□□□□ 0.42
TRBV5-4A0A0C4DH59 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV5-4A0A0C4DH59 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.7■□□□□ 0.42
TRBV5-4A0A0C4DH59 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV5-4A0A0C4DH59 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV5-4A0A0C4DH59 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
TRBV5-4A0A0C4DH59 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV5-4A0A0C4DH59 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV5-4A0A0C4DH59 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV5-4A0A0C4DH59 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV5-4A0A0C4DH59 AC134043.2-201ENST00000624206 2238 ntBASIC17.7■□□□□ 0.42
TRBV5-4A0A0C4DH59 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV5-4A0A0C4DH59 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV5-4A0A0C4DH59 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TRBV5-4A0A0C4DH59 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV5-4A0A0C4DH59 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.69■□□□□ 0.42
TRBV5-4A0A0C4DH59 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
TRBV5-4A0A0C4DH59 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TRBV5-4A0A0C4DH59 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TRBV5-4A0A0C4DH59 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
TRBV5-4A0A0C4DH59 AC012317.2-201ENST00000623305 2251 ntBASIC17.69■□□□□ 0.42
TRBV5-4A0A0C4DH59 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV5-4A0A0C4DH59 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.69■□□□□ 0.42
TRBV5-4A0A0C4DH59 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.69■□□□□ 0.42
TRBV5-4A0A0C4DH59 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV5-4A0A0C4DH59 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRBV5-4A0A0C4DH59 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV5-4A0A0C4DH59 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV5-4A0A0C4DH59 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TRBV5-4A0A0C4DH59 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
TRBV5-4A0A0C4DH59 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.69■□□□□ 0.42
TRBV5-4A0A0C4DH59 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.69■□□□□ 0.42
TRBV5-4A0A0C4DH59 TPSP2-201ENST00000561760 610 ntBASIC17.69■□□□□ 0.42
TRBV5-4A0A0C4DH59 MIR3180-1-201ENST00000580374 94 ntBASIC17.69■□□□□ 0.42
TRBV5-4A0A0C4DH59 MIR3180-3-201ENST00000584616 94 ntBASIC17.69■□□□□ 0.42
TRBV5-4A0A0C4DH59 AC005336.2-201ENST00000593183 939 ntBASIC17.69■□□□□ 0.42
TRBV5-4A0A0C4DH59 AC069148.1-201ENST00000608741 768 ntBASIC17.69■□□□□ 0.42
TRBV5-4A0A0C4DH59 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
TRBV5-4A0A0C4DH59 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TRBV5-4A0A0C4DH59 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV5-4A0A0C4DH59 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV5-4A0A0C4DH59 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
TRBV5-4A0A0C4DH59 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV5-4A0A0C4DH59 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV5-4A0A0C4DH59 AC067852.2-201ENST00000590513 2313 ntBASIC17.69■□□□□ 0.42
TRBV5-4A0A0C4DH59 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV5-4A0A0C4DH59 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.69■□□□□ 0.42
TRBV5-4A0A0C4DH59 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.69■□□□□ 0.42
TRBV5-4A0A0C4DH59 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRBV5-4A0A0C4DH59 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV5-4A0A0C4DH59 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV5-4A0A0C4DH59 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.68■□□□□ 0.42
TRBV5-4A0A0C4DH59 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.68■□□□□ 0.42
TRBV5-4A0A0C4DH59 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV5-4A0A0C4DH59 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.68■□□□□ 0.42
TRBV5-4A0A0C4DH59 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV5-4A0A0C4DH59 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV5-4A0A0C4DH59 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV5-4A0A0C4DH59 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV5-4A0A0C4DH59 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.68■□□□□ 0.42
TRBV5-4A0A0C4DH59 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV5-4A0A0C4DH59 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV5-4A0A0C4DH59 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV5-4A0A0C4DH59 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV5-4A0A0C4DH59 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV5-4A0A0C4DH59 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV5-4A0A0C4DH59 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV5-4A0A0C4DH59 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRBV5-4A0A0C4DH59 ATP5G2P1-201ENST00000433580 426 ntBASIC17.68■□□□□ 0.42
TRBV5-4A0A0C4DH59 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.68■□□□□ 0.42
TRBV5-4A0A0C4DH59 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV5-4A0A0C4DH59 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.68■□□□□ 0.42
TRBV5-4A0A0C4DH59 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.68■□□□□ 0.42
TRBV5-4A0A0C4DH59 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.68■□□□□ 0.42
TRBV5-4A0A0C4DH59 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.68■□□□□ 0.42
TRBV5-4A0A0C4DH59 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV5-4A0A0C4DH59 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRBV5-4A0A0C4DH59 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV5-4A0A0C4DH59 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV5-4A0A0C4DH59 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV5-4A0A0C4DH59 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV5-4A0A0C4DH59 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms