Protein–RNA interactions for Protein: Q9Y5U5

TNFRSF18, Tumor necrosis factor receptor superfamily member 18, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF18Q9Y5U5 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 AC211429.1-201ENST00000415277 523 ntBASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 NIFKP9-201ENST00000419265 221 ntBASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 BX088651.1-201ENST00000540551 451 ntBASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 FLYWCH1P1-201ENST00000460917 1874 ntBASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 AC138028.4-201ENST00000564984 1845 ntBASIC13.16□□□□□ -0.3
TNFRSF18Q9Y5U5 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 SNCG-201ENST00000348795 684 ntTSL 2 BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 AC004980.1-204ENST00000429707 299 ntBASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 SLC25A6P5-201ENST00000435663 894 ntBASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 KSR1P1-201ENST00000446298 240 ntBASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 AC073912.3-201ENST00000624414 853 ntBASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 AP000997.3-201ENST00000623333 2250 ntBASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TNFRSF18Q9Y5U5 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC13.15□□□□□ -0.31
TNFRSF18Q9Y5U5 AC063926.3-201ENST00000624734 5658 ntBASIC13.15□□□□□ -0.31
TNFRSF18Q9Y5U5 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
TNFRSF18Q9Y5U5 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.15□□□□□ -0.31
TNFRSF18Q9Y5U5 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC13.14□□□□□ -0.31
TNFRSF18Q9Y5U5 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TNFRSF18Q9Y5U5 SRI-203ENST00000419179 1307 ntTSL 2 BASIC13.14□□□□□ -0.31
TNFRSF18Q9Y5U5 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TNFRSF18Q9Y5U5 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC13.14□□□□□ -0.31
TNFRSF18Q9Y5U5 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TNFRSF18Q9Y5U5 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms