Protein–RNA interactions for Protein: Q9Y3F1

Putative TAP2-associated 6.5 kDa polypeptide, humanhuman

Predictions only

Length 56 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9Y3F1 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.85■□□□□ 0.77
Q9Y3F1 AP001160.2-201ENST00000596071 487 ntBASIC19.85■□□□□ 0.77
Q9Y3F1 AC004706.3-202ENST00000621574 984 ntBASIC19.85■□□□□ 0.77
Q9Y3F1 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Q9Y3F1 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Q9Y3F1 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Q9Y3F1 AC073592.3-201ENST00000625118 1834 ntBASIC19.85■□□□□ 0.77
Q9Y3F1 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Q9Y3F1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Q9Y3F1 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Q9Y3F1 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Q9Y3F1 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
Q9Y3F1 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Q9Y3F1 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.84■□□□□ 0.77
Q9Y3F1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Q9Y3F1 AC004817.3-201ENST00000602957 2129 ntBASIC19.84■□□□□ 0.77
Q9Y3F1 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Q9Y3F1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Q9Y3F1 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Q9Y3F1 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.84■□□□□ 0.77
Q9Y3F1 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.84■□□□□ 0.77
Q9Y3F1 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.84■□□□□ 0.77
Q9Y3F1 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.84■□□□□ 0.77
Q9Y3F1 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.84■□□□□ 0.77
Q9Y3F1 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.84■□□□□ 0.77
Q9Y3F1 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Q9Y3F1 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.84■□□□□ 0.77
Q9Y3F1 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.84■□□□□ 0.77
Q9Y3F1 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.84■□□□□ 0.77
Q9Y3F1 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
Q9Y3F1 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Q9Y3F1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.84■□□□□ 0.77
Q9Y3F1 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Q9Y3F1 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.84■□□□□ 0.77
Q9Y3F1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.84■□□□□ 0.77
Q9Y3F1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Q9Y3F1 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.83■□□□□ 0.77
Q9Y3F1 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Q9Y3F1 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Q9Y3F1 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Q9Y3F1 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Q9Y3F1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.83■□□□□ 0.77
Q9Y3F1 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Q9Y3F1 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.83■□□□□ 0.77
Q9Y3F1 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.83■□□□□ 0.77
Q9Y3F1 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Q9Y3F1 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Q9Y3F1 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Q9Y3F1 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
Q9Y3F1 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.83■□□□□ 0.77
Q9Y3F1 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.83■□□□□ 0.77
Q9Y3F1 AC108751.1-201ENST00000490852 363 ntBASIC19.83■□□□□ 0.77
Q9Y3F1 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.83■□□□□ 0.77
Q9Y3F1 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.83■□□□□ 0.77
Q9Y3F1 AC064836.3-201ENST00000607928 673 ntBASIC19.83■□□□□ 0.77
Q9Y3F1 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.83■□□□□ 0.77
Q9Y3F1 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Q9Y3F1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Q9Y3F1 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
Q9Y3F1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Q9Y3F1 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
Q9Y3F1 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Q9Y3F1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Q9Y3F1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Q9Y3F1 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.83■□□□□ 0.76
Q9Y3F1 AL049757.1-201ENST00000616842 1596 ntBASIC19.83■□□□□ 0.76
Q9Y3F1 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Q9Y3F1 AC126763.1-201ENST00000552015 2118 ntBASIC19.82■□□□□ 0.76
Q9Y3F1 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q9Y3F1 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Q9Y3F1 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Q9Y3F1 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Q9Y3F1 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q9Y3F1 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Q9Y3F1 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q9Y3F1 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q9Y3F1 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q9Y3F1 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Q9Y3F1 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.82■□□□□ 0.76
Q9Y3F1 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q9Y3F1 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
Q9Y3F1 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.82■□□□□ 0.76
Q9Y3F1 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.82■□□□□ 0.76
Q9Y3F1 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Q9Y3F1 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.82■□□□□ 0.76
Q9Y3F1 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.82■□□□□ 0.76
Q9Y3F1 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Q9Y3F1 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Q9Y3F1 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Q9Y3F1 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.82■□□□□ 0.76
Q9Y3F1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Q9Y3F1 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Q9Y3F1 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Q9Y3F1 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.82■□□□□ 0.76
Q9Y3F1 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q9Y3F1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.82■□□□□ 0.76
Q9Y3F1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Q9Y3F1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Q9Y3F1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Q9Y3F1 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms